Pairwise Alignments

Query, 240 a.a., tRNA (adenosine(37)-N6)-methyltransferase TrmM from Vibrio cholerae E7946 ATCC 55056

Subject, 220 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  139 bits (351), Expect = 3e-38
 Identities = 90/221 (40%), Positives = 121/221 (54%), Gaps = 7/221 (3%)

Query: 25  MPISTDGVLLGSWAFSLSPTTILDIGCGTGLLSLMCAQRFPHAHITALDIEQTAYLAAEH 84
           MP+STDGV+LG+W+       ILDIG G+GLLSLM AQR     ITA+++E+ A  A  +
Sbjct: 1   MPVSTDGVILGAWSPLSQAQQILDIGAGSGLLSLMAAQR-SLGRITAVELEEKAAAACLY 59

Query: 85  NRQQSPWAERIECQHADILHWQPSKR----FAAIICNPPYFNSGETAQHQVRATARHTIS 140
           N  QSPWA+R+   H DI  +    +    F  IICNPPYF  G  A    RA ARHT +
Sbjct: 60  NMVQSPWADRLSVIHCDIQDFCQQTQYHGFFDHIICNPPYFEHGPQANDSHRAMARHTNT 119

Query: 141 LQHQALIERLPQLLEPDGVASFILPKAEGEDFIALARQAGLFVGRYCQVQPTTDKPVHRL 200
           L    L++ + Q L P G AS ILP      F A    + L +     V+   +K  +R+
Sbjct: 120 LGFAPLLDAIIQCLTPQGYASLILPSQSMPRFKACLTSSKLHLTEEVLVKSVENKAANRV 179

Query: 201 LFELHLSPCLPV-ETRLVIREQQG-YSEAFCQLTRDFYLKM 239
           L  L  +      ++ L IR   G Y++   +LTRDFYLK+
Sbjct: 180 LLLLSKNRQSDYRQSELTIRGIDGLYTKHMIELTRDFYLKL 220