Pairwise Alignments

Query, 240 a.a., tRNA (adenosine(37)-N6)-methyltransferase TrmM from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., putative RNA methyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  150 bits (380), Expect = 2e-41
 Identities = 88/239 (36%), Positives = 130/239 (54%), Gaps = 4/239 (1%)

Query: 4   NKLINKSFRFKQFSIEEGTCGMPISTDGVLLGSWAFSLSPTTILDIGCGTGLLSLMCAQR 63
           NK+ N  F+FKQF++    C M + TDGVLLG+WA       ILDIG GTGL++LM AQR
Sbjct: 3   NKMANPFFQFKQFTVWHDKCAMKVGTDGVLLGAWASVQGAHRILDIGTGTGLVALMLAQR 62

Query: 64  -FPHAHITALDIEQTAYLAAEHNRQQSPWAERIECQHADILHWQPSKRFAAIICNPPYFN 122
             P A+I AL+I++ A   A+ N  +SPW +RIE    D L +Q   +F  I+ NPPYF 
Sbjct: 63  SLPDANIVALEIDEAAAGQAKENVARSPWKDRIEVVKQDFLFYQSPDKFDVIVSNPPYFV 122

Query: 123 SGETAQHQVRATARHTISLQHQALIERLPQLLEPDGVASFILPKAEGEDFIALARQAGLF 182
              +   Q R+ ARH  SL ++ L++ +  LL+ +G  + ++P    +     A +  L+
Sbjct: 123 DSLSCPDQQRSMARHNDSLTYEKLLKGVADLLKKEGTFTIVIPTDVADRVKTAASEYHLY 182

Query: 183 VGRYCQVQPTTDKPVHRLL--FELHLSPCLPVETRLVIREQQGYSEAFCQLTRDFYLKM 239
             R   V         R+L  F  +   C+  E    +   Q YSE + +LTR++YL +
Sbjct: 183 ATRQLNVITKPGGTPKRMLITFTFNNEGCIKEELLTEVARHQ-YSEEYKELTREYYLHL 240