Pairwise Alignments

Query, 529 a.a., peptide chain release factor 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 527 a.a., peptide chain release factor RF-3 protein from Sinorhizobium meliloti 1021

 Score =  519 bits (1336), Expect = e-151
 Identities = 267/520 (51%), Positives = 350/520 (67%), Gaps = 7/520 (1%)

Query: 10  VSKRRTFAIISHPDAGKTTITEKVLLFGRAIQVAGTVKGRGSNQHAKSDWMEMEKERGIS 69
           VS+RRTFAIISHPDAGKTT+TEK+LLFG AIQ+AG VK +      +SDWM++E+ERGIS
Sbjct: 9   VSRRRTFAIISHPDAGKTTLTEKLLLFGGAIQLAGEVKAKKDRIQTRSDWMKIERERGIS 68

Query: 70  VTTSVMQFPYGDCLVNLLDTPGHEDFSEDTYRTLTAVDSCLMVIDAAKGVEDRTRKLMEV 129
           V TSVM F Y D + NLLDTPGHEDF++DTYRTLTAVD+ +MVIDAAKG+E RT KL EV
Sbjct: 69  VVTSVMTFEYNDTVFNLLDTPGHEDFADDTYRTLTAVDAAVMVIDAAKGIEPRTLKLFEV 128

Query: 130 TRLRDTPIVTFMNKLDREIRDPMELMDEVENELKIACSPITWPIGCGKEFKGVYHIHRDE 189
            RLRD PI+TF+NK+DRE RDP E++DEVE +L + C+P+TWPIG  K F G YH+  DE
Sbjct: 129 CRLRDIPIITFVNKMDRESRDPFEILDEVEQKLALDCAPVTWPIGRSKTFCGTYHLATDE 188

Query: 190 TILYTSGQGHTIQEERIIKGLDNPELDQAVGADLAAQLREELELVLGASHEFDRELFLQG 249
                  +G   QE R+ K  D       +  +      EE  L + A   FDR+ FL+G
Sbjct: 189 V------RGADTQE-RLTKVNDPEMASHRLPENERDTFIEETSLAIEACKPFDRKAFLEG 241

Query: 250 ELTPVFFGTALGNFGVDHMLDGLTQWAPSPMPRQAAERVVEASEEKFTGFVFKIQANMDP 309
            LTPVFFG+AL NFGV  +++ L  +AP P  + A  R VEA++++ T FVFKIQANMDP
Sbjct: 242 HLTPVFFGSALRNFGVRDLINALADFAPPPRAQVADIRTVEATDDRMTAFVFKIQANMDP 301

Query: 310 KHRDRIAFVRIVSGTYKQGMKMNHVRLGKQVNISDAVTFMAGDRARAEEAFAGDIIGLHN 369
            HRDRIAFVR+ SG  ++GMK    R GKQ+ ++    F A  R  A+ AFAGD++G+ N
Sbjct: 302 NHRDRIAFVRVCSGKLERGMKARLSRTGKQMGLTAPQFFFASQRQLADTAFAGDVVGIPN 361

Query: 370 HGTIQIGDTFTQGETLKFTGIPNFAPELFRRIRLRDPLKQKQLLKGLVQLSEEGAVQVFR 429
           HGT++IGDT T+GE L F G+PNFAPE+ RR+RL D +K K+L + L Q++EEG VQ+F 
Sbjct: 362 HGTLRIGDTLTEGEPLVFQGVPNFAPEILRRVRLEDAMKAKKLKEALQQMAEEGVVQLFS 421

Query: 430 PLQNNDLIVGAVGVLQFDVVVSRLKSEYNVEAIYEGVNVATARWVECDDVKKFEEFKRKN 489
           P      IVG VG LQ DV+  RL++EY++   +E    +  RW+  +     E+F   +
Sbjct: 422 PDDGAPAIVGVVGALQLDVLRERLQAEYSLPVSFEMSRFSICRWISAESPADLEKFIATH 481

Query: 490 QSNLALDGGDNLAYIAPTMVNLNLAQERSPEVKFRATREH 529
           + ++A D   +  Y+A    +L    ER P VK  A +E+
Sbjct: 482 RGDIARDLDGDPVYLAQDGFSLRYESERYPAVKMVAIKEY 521