Pairwise Alignments

Query, 529 a.a., peptide chain release factor 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 696 a.a., elongation factor G (RefSeq) from Shewanella amazonensis SB2B

 Score =  142 bits (359), Expect = 3e-38
 Identities = 137/499 (27%), Positives = 214/499 (42%), Gaps = 60/499 (12%)

Query: 9   EVSKRRTFAIISHPDAGKTTITEKVLLFGRAIQVAGTVKGRGSNQHAKSDWMEMEKERGI 68
           ++SK R   I +H DAGKTT TE++L     I   G V    S      D+M+ E ERGI
Sbjct: 3   DLSKYRNIGIFAHVDAGKTTTTERILKLTGKIHKLGEVHDGASTM----DFMDQEAERGI 58

Query: 69  SVTTSVMQFPYGDCLVNLLDTPGHEDFSEDTYRTLTAVDSCLMVIDAAKGVEDRTRKLME 128
           ++ ++     +     N++DTPGH DF+ + YR+L  +D  + V   + GVE ++     
Sbjct: 59  TIQSAATTCFWKGHRFNVIDTPGHVDFTVEVYRSLKVLDGGIGVFCGSGGVEPQSETNWR 118

Query: 129 VTRLRDTPIVTFMNKLDREIRDPMELMDEVENELKIACSPITWPIGCGKEFKGVYHIHRD 188
                +   + F+NKLDR   D + ++ +V+  L      +T PIG   EF GV  +   
Sbjct: 119 YANESEVARLIFVNKLDRIGADFLRVVGQVKKVLAANPLVMTLPIGREDEFTGVVDVLNR 178

Query: 189 ETILYTSGQGHTIQEERIIKGLDNPELDQAVGADLAAQLREELELVLGASHEFDREL--- 245
           +  ++               GL        V AD+   + E  E+++  + E D +L   
Sbjct: 179 QAFIWDD------------SGLPENYTVTDVPADMVDLVEEYREMLVETAVEQDDDLMEA 226

Query: 246 FLQGE-------------------LTPVFFGTALGNFGVDHMLDGLTQWAPSPM------ 280
           +++GE                     P F G+A  N G+  +LD +  + PSP       
Sbjct: 227 YMEGEEPSIEDLKRCIRKGTINLSFFPTFCGSAFKNKGMQLVLDAVVDYLPSPTEVEPQP 286

Query: 281 ---PRQAAE--RVVEAS-EEKFTGFVFKIQANMDPKHRDRIAFVRIVSGTYKQGMKMNHV 334
              P    E  +V   S +E      FKI   MD +    + FVRI SG  K+G  + + 
Sbjct: 287 LTDPETGEETGKVATVSVDEPLRALAFKI---MDDRF-GALTFVRIYSGKLKKGDTILNS 342

Query: 335 RLGKQVNISDAVTFMAGDRARAEEAFAGDIIGLHNHGTIQIGDTFTQGE---TLKFTGIP 391
             GK   I   V   A DR   + A AGDII +     +Q G T    +   TL+    P
Sbjct: 343 ATGKTERIGRMVEMHANDRNEIDSAQAGDIIAVVGMKNVQTGHTLCDPKHECTLEPMIFP 402

Query: 392 NFAPELFRRIRLRDPLKQKQLLKGLVQL-SEEGAVQVFRPLQNNDLIVGAVGVLQFDVVV 450
              P +   +  +D    ++L   L ++ +E+ + QV    +  D I+  +G L  D+ V
Sbjct: 403 --TPVISIAVTPKDKGASEKLGVALGKMVAEDPSFQVETDQETGDTILKGMGELHLDIKV 460

Query: 451 SRLKSEYNVEAIYEGVNVA 469
             LK  + VE       VA
Sbjct: 461 DILKRTFGVELTVGAPQVA 479