Pairwise Alignments

Query, 529 a.a., peptide chain release factor 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 698 a.a., elongation factor G (RefSeq) from Shewanella amazonensis SB2B

 Score =  160 bits (406), Expect = 1e-43
 Identities = 134/490 (27%), Positives = 219/490 (44%), Gaps = 47/490 (9%)

Query: 3   TTPYFGEVSKRRTFAIISHPDAGKTTITEKVLLFGRAIQVAGTVKGRGSNQHAKSDWMEM 62
           TTP    + + R   I +H DAGKTT TE+VL +       G V        A +DWM  
Sbjct: 4   TTP----IERYRNIGICAHVDAGKTTTTERVLFYTGLSHKIGEVHDGA----ATTDWMVQ 55

Query: 63  EKERGISVTTSV-------MQFPYGDCLVNLLDTPGHEDFSEDTYRTLTAVDSCLMVIDA 115
           E+ERGI++T++        M   + +  +N++DTPGH DF+ +  R+L  +D  ++V   
Sbjct: 56  EQERGITITSAAVTTFWRGMDAQFTEHRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCG 115

Query: 116 AKGVEDRTRKLMEVTRLRDTPIVTFMNKLDREIRDPMELMDEVENELKIACSPITWPIGC 175
           A GVE ++  +         P + F+NK+DR   D   + +++   L   C PI   IG 
Sbjct: 116 ASGVEPQSETVWRQANKYGVPRMVFVNKMDRAGADFDRVCNQIRKRLGATCVPIQLNIGA 175

Query: 176 GKEFKGVYHIHRDETILYT-SGQGHTIQEERIIKGLDNPELDQAVG-----ADLAAQLRE 229
            + FKGV  + + + I +  + QG T   E I   L    LD+A        + AA+  E
Sbjct: 176 EEHFKGVIDLIKMKAINWNEADQGMTFTYEDIPADL----LDKATEMREYLVESAAEATE 231

Query: 230 EL--------ELVLGASHEFDRELFLQGELTPVFFGTALGNFGVDHMLDGLTQWAPSPMP 281
           EL        EL         R+  +  E+     G+A  N GV  +LD + ++ P+P+ 
Sbjct: 232 ELMEKYLETGELTEAEIKAALRQRTINNEIVLATCGSAFKNKGVQAVLDAVVEYLPAPVD 291

Query: 282 RQAAERVVEASEE---------KFTGFVFKIQANMDPKHRDRIAFVRIVSGTYKQGMKMN 332
             A + + +  +E          F+   FKI    DP     + F+R+ SG  + G  + 
Sbjct: 292 VPAIKGIDDYEKEVERHADDNAPFSALAFKIAT--DP-FVGTLTFIRVYSGVLESGASVY 348

Query: 333 HVRLGKQVNISDAVTFMAGDRARAEEAFAGDIIGLHNHGTIQIGDTFTQGETLKFTGIPN 392
           +    K+  I   V   A DR   +E  AGDI        +  GDT    +         
Sbjct: 349 NSVKQKRERIGRIVQMHANDRTELKEVRAGDIAAAIGLKEVTTGDTLCDSDNKVVLERME 408

Query: 393 F-APELFRRIRLRDPLKQKQLLKGLVQL-SEEGAVQVFRPLQNNDLIVGAVGVLQFDVVV 450
           F  P +   +  R    Q ++   L +L +E+ + +V    ++   ++  +G L  D++V
Sbjct: 409 FPEPVITIAVEPRSKADQDKMGIALQKLAAEDPSFRVETDAESGQTLISGMGELHLDIIV 468

Query: 451 SRLKSEYNVE 460
            R++ E+NVE
Sbjct: 469 DRMRREFNVE 478