Pairwise Alignments

Query, 529 a.a., peptide chain release factor 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 530 a.a., Peptide chain release factor 3 (NCBI) from Rhodospirillum rubrum S1H

 Score =  564 bits (1453), Expect = e-165
 Identities = 278/521 (53%), Positives = 379/521 (72%), Gaps = 1/521 (0%)

Query: 9   EVSKRRTFAIISHPDAGKTTITEKVLLFGRAIQVAGTVKGRGSNQHAKSDWMEMEKERGI 68
           EV +RRTFAIISHPDAGKTT+TEK+LLFG AIQ+AG VK RG  + A+SDWM++E+ERGI
Sbjct: 7   EVQRRRTFAIISHPDAGKTTLTEKLLLFGGAIQLAGAVKARGEVRRARSDWMKVEQERGI 66

Query: 69  SVTTSVMQFPYGDCLVNLLDTPGHEDFSEDTYRTLTAVDSCLMVIDAAKGVEDRTRKLME 128
           SV +SVM + Y     NLLDTPGHEDFSEDTYRTLTAVDS +MVIDAAKG+E++TRKL E
Sbjct: 67  SVASSVMSYEYAGRAFNLLDTPGHEDFSEDTYRTLTAVDSAVMVIDAAKGIEEQTRKLFE 126

Query: 129 VTRLRDTPIVTFMNKLDREIRDPMELMDEVENELKIACSPITWPIGCGKEFKGVYHIHRD 188
           V RLRD PI+TF+NKLDRE +DP +L+DE+E  L +  +P +WPIG G++F G Y +  D
Sbjct: 127 VCRLRDVPIITFINKLDREGQDPFDLLDEIEQTLALDVTPASWPIGMGRDFLGCYDLFND 186

Query: 189 ETILYTSG-QGHTIQEERIIKGLDNPELDQAVGADLAAQLREELELVLGASHEFDRELFL 247
              L   G +G         +GLD+P+LD+ + AD  A+LR ++E+V G    FD E + 
Sbjct: 187 RLALMAKGAKGSLPTPGERCEGLDDPKLDKMLPADAVAKLRGDVEMVRGLCPAFDAEAYR 246

Query: 248 QGELTPVFFGTALGNFGVDHMLDGLTQWAPSPMPRQAAERVVEASEEKFTGFVFKIQANM 307
            G +TPVFFG+A+ NFGV  +L+G+   APSP P+    R ++ +E+K TGFVFKIQANM
Sbjct: 247 AGTMTPVFFGSAVNNFGVRELLEGVAHLAPSPRPQPTTTRDIQPTEDKVTGFVFKIQANM 306

Query: 308 DPKHRDRIAFVRIVSGTYKQGMKMNHVRLGKQVNISDAVTFMAGDRARAEEAFAGDIIGL 367
           DPKHRDRIAFVR+ SG +++GMK+ HVR GKQ+N+ + V F+A +R  AEEAFAGDI+G+
Sbjct: 307 DPKHRDRIAFVRLCSGPFRRGMKLFHVRTGKQMNMHNPVMFLARERELAEEAFAGDIMGV 366

Query: 368 HNHGTIQIGDTFTQGETLKFTGIPNFAPELFRRIRLRDPLKQKQLLKGLVQLSEEGAVQV 427
            NHG ++IGDT ++GE L+ TGIP+FAPE+ +++R +DPL+ K L + L Q++EEGA +V
Sbjct: 367 PNHGQLRIGDTLSEGENLRVTGIPSFAPEMLQKVRPKDPLRAKHLGRALQQIAEEGAARV 426

Query: 428 FRPLQNNDLIVGAVGVLQFDVVVSRLKSEYNVEAIYEGVNVATARWVECDDVKKFEEFKR 487
           F+P+   D IVG VG LQF+V+  R+++E++V  ++E   + TARWV  +D    ++F  
Sbjct: 427 FKPIMGADWIVGVVGPLQFEVLADRIRTEFDVPVLFESTALYTARWVTAEDPLVLKKFLD 486

Query: 488 KNQSNLALDGGDNLAYIAPTMVNLNLAQERSPEVKFRATRE 528
            NQ++LA D   +  ++A    +L+ A E  P + F  T+E
Sbjct: 487 GNQASLAEDHDGDPVFLARNAWHLDRAAEDFPLIVFHKTKE 527