Pairwise Alignments

Query, 529 a.a., peptide chain release factor 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., peptide chain release factor 3 from Rhodopseudomonas palustris CGA009

 Score =  518 bits (1333), Expect = e-151
 Identities = 271/530 (51%), Positives = 358/530 (67%), Gaps = 8/530 (1%)

Query: 2   STTPYF--GEVSKRRTFAIISHPDAGKTTITEKVLLFGRAIQVAGTVKGRGSNQHAKSDW 59
           S+TPY    EV++RRTFAIISHPDAGKTT+TEK+LLFG AI +AG VK +G  ++ +SDW
Sbjct: 12  SSTPYSLAHEVARRRTFAIISHPDAGKTTLTEKLLLFGGAINLAGQVKAKGERRNTRSDW 71

Query: 60  MEMEKERGISVTTSVMQFPYGDCLVNLLDTPGHEDFSEDTYRTLTAVDSCLMVIDAAKGV 119
           M++E++RGISV TSVM F +   + NLLDTPGHEDFSEDTYRTLTAVDS +MVIDAAKG+
Sbjct: 72  MKIERDRGISVVTSVMTFEFDGLVFNLLDTPGHEDFSEDTYRTLTAVDSAVMVIDAAKGI 131

Query: 120 EDRTRKLMEVTRLRDTPIVTFMNKLDREIRDPMELMDEVENELKIACSPITWPIGCGKEF 179
           E RTRKL EV RLRD PI+TF+NK+DRE RD  +L+DE+E  L +  +P+TWP+G G++F
Sbjct: 132 EARTRKLFEVCRLRDIPIITFINKMDRESRDTFDLLDEIEKTLALDTTPMTWPVGRGRDF 191

Query: 180 KGVYHIHRDETILYTSGQGHTIQEERI-IKGLDNPELDQAVGADLAAQLREELELVLGAS 238
            G Y +      L   G   T   E+I I+ L     +  V A     ++EELEL   A 
Sbjct: 192 LGTYDVLDGGVRLLEGGGAKTGAAEQISIEELGKRHANLDVAA-----VKEELELATEAC 246

Query: 239 HEFDRELFLQGELTPVFFGTALGNFGVDHMLDGLTQWAPSPMPRQAAERVVEASEEKFTG 298
             FD E F +G LTPV+FG+AL NFGV  +L GL ++AP P  +++  R + A E K + 
Sbjct: 247 KPFDLEAFREGHLTPVYFGSALRNFGVGDLLQGLGRYAPPPRAQESNLRKIAADEPKMSA 306

Query: 299 FVFKIQANMDPKHRDRIAFVRIVSGTYKQGMKMNHVRLGKQVNISDAVTFMAGDRARAEE 358
           FVFKIQANMDP HRDRIAF R+ SG   +GMK   VR GK + +S    F A DR+ A+E
Sbjct: 307 FVFKIQANMDPNHRDRIAFARLCSGKLTRGMKAKLVRTGKAMPLSSPQFFFAQDRSVADE 366

Query: 359 AFAGDIIGLHNHGTIQIGDTFTQGETLKFTGIPNFAPELFRRIRLRDPLKQKQLLKGLVQ 418
           AFAGD++G+ NHGT++IGDT T+GE + F G+P+FAPE+ RR+RL D +K K+L + L Q
Sbjct: 367 AFAGDVVGIPNHGTLRIGDTLTEGEDVTFIGVPSFAPEIVRRVRLGDAMKAKKLKEALQQ 426

Query: 419 LSEEGAVQVFRPLQNNDLIVGAVGVLQFDVVVSRLKSEYNVEAIYEGVNVATARWVECDD 478
           +SEEG VQVFRP      +VG VG LQ DV+ +RL++EY +   +E      ARW+  DD
Sbjct: 427 MSEEGVVQVFRPRDGAPALVGVVGPLQLDVLKARLEAEYQLPVDFEVSEFQLARWISSDD 486

Query: 479 VKKFEEFKRKNQSNLALDGGDNLAYIAPTMVNLNLAQERSPEVKFRATRE 528
            KK + F   N S++A D   +  Y+A     L   ++R+  + F   ++
Sbjct: 487 RKKLDTFIANNGSSIADDVDGDPVYLAKNEFYLGYTRDRAEGIVFSEIKD 536