Pairwise Alignments

Query, 529 a.a., peptide chain release factor 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 526 a.a., peptide chain release factor 3 (RefSeq) from Shewanella loihica PV-4

 Score =  855 bits (2209), Expect = 0.0
 Identities = 417/524 (79%), Positives = 469/524 (89%), Gaps = 1/524 (0%)

Query: 6   YFGEVSKRRTFAIISHPDAGKTTITEKVLLFGRAIQVAGTVKGRGSNQHAKSDWMEMEKE 65
           Y  EV KRRTFAIISHPDAGKTTITEKVLLFG+A+Q AGTVKG+ S QHAKSDWMEMEK+
Sbjct: 4   YTVEVDKRRTFAIISHPDAGKTTITEKVLLFGQALQKAGTVKGKKSGQHAKSDWMEMEKD 63

Query: 66  RGISVTTSVMQFPYGDCLVNLLDTPGHEDFSEDTYRTLTAVDSCLMVIDAAKGVEDRTRK 125
           RGIS+TTSVMQFPY + LVNLLDTPGHEDFSEDTYRTLTAVDSCLMVID+AKGVE RT K
Sbjct: 64  RGISITTSVMQFPYREALVNLLDTPGHEDFSEDTYRTLTAVDSCLMVIDSAKGVEQRTIK 123

Query: 126 LMEVTRLRDTPIVTFMNKLDREIRDPMELMDEVENELKIACSPITWPIGCGKEFKGVYHI 185
           LMEVTRLRDTPIVTFMNKLDR+IRDP+ELMDEVEN L IAC+PITWPIG GKEFKGVYH+
Sbjct: 124 LMEVTRLRDTPIVTFMNKLDRDIRDPIELMDEVENILNIACAPITWPIGAGKEFKGVYHL 183

Query: 186 HRDETILYTSGQGHTIQEERIIKGLDNPELDQAVGADLAAQLREELELVLGASHEFDREL 245
            RDE ILY +G GHTIQ+ R+IKGLDNPELD+A+G+  A  LR+E+ELVLGASHEFD E 
Sbjct: 184 LRDEVILYQNGMGHTIQDSRVIKGLDNPELDEAIGS-YAQDLRDEMELVLGASHEFDLEA 242

Query: 246 FLQGELTPVFFGTALGNFGVDHMLDGLTQWAPSPMPRQAAERVVEASEEKFTGFVFKIQA 305
           FL+GELTPVFFGTALGNFGVDH+LDG+ +WAP P PR++ +R VE  E KF+GFVFKIQA
Sbjct: 243 FLKGELTPVFFGTALGNFGVDHILDGIVEWAPRPQPRESDQRNVEPDESKFSGFVFKIQA 302

Query: 306 NMDPKHRDRIAFVRIVSGTYKQGMKMNHVRLGKQVNISDAVTFMAGDRARAEEAFAGDII 365
           NMDPKHRDR+AF+R+ SG Y+QGMKM+HVR+GK VN+SDA+TFMAGDR RAE A+ GDII
Sbjct: 303 NMDPKHRDRVAFMRVCSGRYEQGMKMHHVRIGKDVNVSDALTFMAGDRNRAEAAYPGDII 362

Query: 366 GLHNHGTIQIGDTFTQGETLKFTGIPNFAPELFRRIRLRDPLKQKQLLKGLVQLSEEGAV 425
           GLHNHGTI+IGDTFTQGE L+FTG+PNFAPE+FRRIRL+DPLKQKQLLKGLVQLSEEGAV
Sbjct: 363 GLHNHGTIRIGDTFTQGEKLRFTGVPNFAPEMFRRIRLKDPLKQKQLLKGLVQLSEEGAV 422

Query: 426 QVFRPLQNNDLIVGAVGVLQFDVVVSRLKSEYNVEAIYEGVNVATARWVECDDVKKFEEF 485
           QVFRPL +NDLIVGAVGVLQF+VVV RLKSEY VEAIYE ++VATARWV   D KK EEF
Sbjct: 423 QVFRPLDSNDLIVGAVGVLQFEVVVQRLKSEYKVEAIYEAISVATARWVYSKDAKKLEEF 482

Query: 486 KRKNQSNLALDGGDNLAYIAPTMVNLNLAQERSPEVKFRATREH 529
           KRK  +NLALDGGDNL Y+APTMVNLNL+ ER P+++F  TRE+
Sbjct: 483 KRKCSNNLALDGGDNLTYVAPTMVNLNLSMERYPDIEFAKTREN 526