Pairwise Alignments

Query, 529 a.a., peptide chain release factor 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 526 a.a., peptide chain release factor 3 (RefSeq) from Shewanella sp. ANA-3

 Score =  861 bits (2225), Expect = 0.0
 Identities = 417/521 (80%), Positives = 470/521 (90%), Gaps = 1/521 (0%)

Query: 9   EVSKRRTFAIISHPDAGKTTITEKVLLFGRAIQVAGTVKGRGSNQHAKSDWMEMEKERGI 68
           EV KRRTFAIISHPDAGKTTITEKVLLFG A+Q AGTVKG+ S QHAKSDWMEMEK+RGI
Sbjct: 7   EVDKRRTFAIISHPDAGKTTITEKVLLFGNALQKAGTVKGKKSGQHAKSDWMEMEKDRGI 66

Query: 69  SVTTSVMQFPYGDCLVNLLDTPGHEDFSEDTYRTLTAVDSCLMVIDAAKGVEDRTRKLME 128
           S+TTSVMQFPYG  LVNLLDTPGHEDFSEDTYRTLTAVDSCLMVID+AKGVEDRT KLME
Sbjct: 67  SITTSVMQFPYGGALVNLLDTPGHEDFSEDTYRTLTAVDSCLMVIDSAKGVEDRTIKLME 126

Query: 129 VTRLRDTPIVTFMNKLDREIRDPMELMDEVENELKIACSPITWPIGCGKEFKGVYHIHRD 188
           VTRLRDTPIVTFMNKLDR+IRDP+ELMDEVE+ L IAC+PITWPIG GKEFKGVYHI RD
Sbjct: 127 VTRLRDTPIVTFMNKLDRDIRDPIELMDEVEDVLNIACAPITWPIGSGKEFKGVYHILRD 186

Query: 189 ETILYTSGQGHTIQEERIIKGLDNPELDQAVGADLAAQLREELELVLGASHEFDRELFLQ 248
           E +LY SG GHTIQE R+I+G+DNPELD+A+G+  AA LR+E+ELV GAS+EFD + FL+
Sbjct: 187 EVVLYQSGMGHTIQERRVIEGIDNPELDKAIGS-YAADLRDEMELVRGASNEFDHQAFLK 245

Query: 249 GELTPVFFGTALGNFGVDHMLDGLTQWAPSPMPRQAAERVVEASEEKFTGFVFKIQANMD 308
           GELTPVFFGTALGNFGVDH+LDG+ +WAP P+PR++  R++   EEKFTGFVFKIQANMD
Sbjct: 246 GELTPVFFGTALGNFGVDHILDGIVEWAPKPLPRESDARMIMPDEEKFTGFVFKIQANMD 305

Query: 309 PKHRDRIAFVRIVSGTYKQGMKMNHVRLGKQVNISDAVTFMAGDRARAEEAFAGDIIGLH 368
           PKHRDR+AF+R+ SG Y+QGMKM+HVR+GK VN+SDA+TFMAGDR RAE A+ GDIIGLH
Sbjct: 306 PKHRDRVAFMRVCSGRYEQGMKMHHVRIGKDVNVSDALTFMAGDRERAEVAYPGDIIGLH 365

Query: 369 NHGTIQIGDTFTQGETLKFTGIPNFAPELFRRIRLRDPLKQKQLLKGLVQLSEEGAVQVF 428
           NHGTI+IGDTFTQGE  +FTG+PNFAPE+FRRIRLRDPLKQKQLLKGLVQLSEEGAVQVF
Sbjct: 366 NHGTIRIGDTFTQGEKFRFTGVPNFAPEMFRRIRLRDPLKQKQLLKGLVQLSEEGAVQVF 425

Query: 429 RPLQNNDLIVGAVGVLQFDVVVSRLKSEYNVEAIYEGVNVATARWVECDDVKKFEEFKRK 488
           RPL +NDLIVGAVGVLQF+VVV RLKSEYNVEAIYEG++V+TARWV C D +K EEF+RK
Sbjct: 426 RPLDSNDLIVGAVGVLQFEVVVGRLKSEYNVEAIYEGISVSTARWVYCKDERKLEEFRRK 485

Query: 489 NQSNLALDGGDNLAYIAPTMVNLNLAQERSPEVKFRATREH 529
              NLALDGGDNL YIAPTMVNLNL+ ER P+++F  TREH
Sbjct: 486 CSQNLALDGGDNLTYIAPTMVNLNLSMERYPDIEFAKTREH 526