Pairwise Alignments

Query, 529 a.a., peptide chain release factor 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 698 a.a., elongation factor G (RefSeq) from Shewanella sp. ANA-3

 Score =  148 bits (373), Expect = 7e-40
 Identities = 131/497 (26%), Positives = 213/497 (42%), Gaps = 61/497 (12%)

Query: 3   TTPYFGEVSKRRTFAIISHPDAGKTTITEKVLLFGRAIQVAGTVKGRGSNQHAKSDWMEM 62
           TTP    + + R   I +H DAGKTT TE+VL +       G V        A +DWM  
Sbjct: 4   TTP----IERYRNIGICAHVDAGKTTTTERVLFYTGLSHKIGEVHDGA----ATTDWMVQ 55

Query: 63  EKERGISVTTSV-------MQFPYGDCLVNLLDTPGHEDFSEDTYRTLTAVDSCLMVIDA 115
           E+ERGI++T++        M   + +  +N++DTPGH DF+ +  R+L  +D  ++V   
Sbjct: 56  EQERGITITSAAVTTFWRGMDAQFTEHRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCG 115

Query: 116 AKGVEDRTRKLMEVTRLRDTPIVTFMNKLDREIRDPMELMDEVENELKIACSPITWPIGC 175
           + GVE ++  +         P + F+NK+DR   D   ++ ++   L   C PI   IG 
Sbjct: 116 SSGVEPQSETVWRQADKYRVPRLVFVNKMDRAGADFERVVKQIRTRLGATCVPIQLNIGA 175

Query: 176 GKEFKGVYHIHRDETILYT-SGQGHTIQEERIIKGLDNPELDQAVGADLAAQLREEL-EL 233
            + F GV  + + + I +  + QG T   E I   L          AD AA++ E L E 
Sbjct: 176 EENFTGVIDLIKMKAINWNEADQGMTFSYEEIPAEL----------ADKAAEMHEYLVEA 225

Query: 234 VLGASHEFD------------------RELFLQGELTPVFFGTALGNFGVDHMLDGLTQW 275
              AS E                    R+  +  E+     G+A  N GV  +LD + ++
Sbjct: 226 AAEASDELMDKYLEEGTLSEDEIKKALRQRTINNEIVLATCGSAFKNKGVQAVLDAVVEF 285

Query: 276 APSPMPRQAAERVVEASEE---------KFTGFVFKIQANMDPKHRDRIAFVRIVSGTYK 326
            P+P+     + + +  +E          F    FKI    DP     + F+R+ SG  +
Sbjct: 286 LPAPVDVPPIKGIDDDEQEVERPSDDNAPFAALAFKIAT--DP-FVGTLTFIRVYSGVLE 342

Query: 327 QGMKMNHVRLGKQVNISDAVTFMAGDRARAEEAFAGDIIGLHNHGTIQIGDTFTQGETLK 386
            G  + +    K+  I   V   A DR   +E  AGDI        +  GDT    +   
Sbjct: 343 SGSGVYNSVKQKRERIGRIVQMHANDRTELKEVRAGDIAAAIGLKEVTTGDTLCDPDHKV 402

Query: 387 FTGIPNFAPELFRRIRLRDPLKQKQLLKGLV---QLSEEGAVQVFRPLQNNDLIVGAVGV 443
                 F PE    I +    K  Q   G+      +E+ + +V    +++  ++  +G 
Sbjct: 403 ILERMEF-PEPVITIAVEPKSKADQDKMGIALQKLAAEDPSFRVETDEESSQTLISGMGE 461

Query: 444 LQFDVVVSRLKSEYNVE 460
           L  D++V R++ E+ VE
Sbjct: 462 LHLDIIVDRMRREFGVE 478