Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 692 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N2E2

 Score =  330 bits (845), Expect = 2e-94
 Identities = 170/428 (39%), Positives = 255/428 (59%), Gaps = 4/428 (0%)

Query: 233 LAESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHSTGVLFYLDLDRFKTINDSLG 292
           LA  +L QLA +D LTGL NR LL  ++  A+   Q       L ++DLD FK +ND+ G
Sbjct: 253 LANRELTQLALHDPLTGLPNRVLLADRIDQAMHRVQEQGGCFALMFIDLDGFKPVNDAFG 312

Query: 293 HTIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIPYLSPAKAEEVAKQLLTLISNPY 352
           H +GD L++ VALR+    ++    ARIGGDEF +L+    P  A  +A + + LI+  +
Sbjct: 313 HHMGDLLLRDVALRLREDLRSQDTLARIGGDEFVLLVQLAEPDDALRLAARQVGLIARTF 372

Query: 353 AVDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTALYRAKASGRNKFMFYEPEMQAQVES 412
            V +H    + S+GI+++P  G    ++L  AD A+Y AK +G+N + F++  M +    
Sbjct: 373 RVAEHDLQISASVGIALYPGNGQSADELLMNADAAMYHAKGAGKNGYSFFDASMNSNARK 432

Query: 413 FLEIEKGLHEALNQRQLELFYQPQVDEQH-NIIGVEALIRWNHPKRGLLPPGVFMPIAEE 471
            L++ + L  A+ QRQ  L+YQP+ D  +   +G EAL+RW+HP +GLL P  F+ +AE+
Sbjct: 433 QLQLLQDLRIAVEQRQFSLYYQPKFDAANGQPVGAEALLRWSHPTQGLLMPDTFIDLAEK 492

Query: 472 TGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRLAINISPLQFAQESFIEQVNHALRQA 531
           TG I+PIG W++ +AC Q  +W   G       R+A+N+S LQF     ++ V  AL   
Sbjct: 493 TGLIIPIGEWVLNEACRQMREWYVLGYTD---WRIAVNLSALQFCHTGLVQSVAKALETH 549

Query: 532 GITGEPIELEITESLLLENVESAIEKMAKLKESQISISIDDFGTGYSSLRYLKHLAVDVL 591
            +    + LEITE+  + + ++++  + +L +  + +SIDDFGTGYSSL YLK L  + L
Sbjct: 550 QLPANSLTLEITETTAMSDADASMTVLQQLSDMGVDLSIDDFGTGYSSLMYLKRLPANEL 609

Query: 592 KIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIAEGVEDTSELAALKKLGCNQFQGYL 651
           KIDR FV  L  D +D AIV  I+A+ + L L ++AEGVE   +   L +LGC+  QGYL
Sbjct: 610 KIDRGFVRDLEHDSDDAAIVSAIVALGQALGLRIVAEGVETDVQQDFLTQLGCDSLQGYL 669

Query: 652 FDKPLRAE 659
              PL AE
Sbjct: 670 LGHPLPAE 677