Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 635 a.a., GGDEF domain protein from Pseudomonas fluorescens FW300-N2E2

 Score =  337 bits (863), Expect = 1e-96
 Identities = 188/457 (41%), Positives = 272/457 (59%), Gaps = 8/457 (1%)

Query: 209 LRLTHDD--ELSELASTFQSMWKGKELAESKLNQLAYYDSLTGLANRSLLLQKLSDAIET 266
           +R+  DD  E+S   + F  +   K+ +E +L  LA++D LTGL NR L   +   A+ +
Sbjct: 174 IRVIRDDSGEISHYVAVFSDISAIKD-SEHELAYLAHHDPLTGLPNRLLFSDRTEQALAS 232

Query: 267 AQNSHSTGVLFYLDLDRFKTINDSLGHTIGDQLIKAVALRMEAWTKNDYLSARIGGDEFA 326
           AQ       L  LDLD FK INDSLGH +GD+L+K VA R           AR+GGDEFA
Sbjct: 233 AQLHKRGCALLLLDLDHFKNINDSLGHNVGDELLKGVAERFRGLFAPGVTLARLGGDEFA 292

Query: 327 VLIPYLS-PAKAEEVAKQLLTLISNPYAVDDHQFYCTVSIGISVFPSVGSCNIDVLRQAD 385
           VL+   S P +A  +A+++L  +  P   DDH  +   SIGIS+FP        +LR AD
Sbjct: 293 VLVENCSQPGQAAALARRILDALKEPLRFDDHALFINASIGISLFPGDALSAGQLLRNAD 352

Query: 386 TALYRAKASGRNKFMFYEPEMQAQVESFLEIEKGLHEALNQRQLELFYQPQVD-EQHNII 444
           +AL++AK++GR+ +  Y  E+ A  +  +EI   L  AL Q++L + YQP  D     +I
Sbjct: 353 SALFKAKSAGRDGYALYTEELTAHAQQRVEIAFELRRALQQQELRVHYQPVHDLATSRLI 412

Query: 445 GVEALIRWNHPKRGLLPPGVFMPIAEETGQILPIGNWIIEQACYQYAQWKKQGILPPHFR 504
           GVEAL+RW HP RGL+ P  F+PIAE TG I  +  W+++QAC Q  QW++ G+      
Sbjct: 413 GVEALVRWEHPTRGLVSPAEFIPIAERTGLIAQVDAWVMDQACRQMCQWQQAGVA---LS 469

Query: 505 RLAINISPLQFAQESFIEQVNHALRQAGITGEPIELEITESLLLENVESAIEKMAKLKES 564
            +A+N+S   FA+    +QV   L   G+    +ELE+TES ++++ E A+E+M +L+E 
Sbjct: 470 FVAVNVSSRLFARRELYDQVAQVLHDTGLDPGCLELEVTESAVMDDPEVALEQMHRLREL 529

Query: 565 QISISIDDFGTGYSSLRYLKHLAVDVLKIDRSFVNQLHLDDNDQAIVDTILAIARKLNLE 624
            + ++IDDFGTGYSSL  LK L V  LKID+ FV  L  D++D AIV  I+A+A  + ++
Sbjct: 530 GVRLAIDDFGTGYSSLLRLKRLPVQKLKIDQGFVAGLPWDEDDAAIVRVIIALAHSMGMQ 589

Query: 625 VIAEGVEDTSELAALKKLGCNQFQGYLFDKPLRAEEI 661
           V AEG+E   + A L    C   QGY F +P+ A ++
Sbjct: 590 VHAEGIEQREQAAFLLGQACELGQGYWFGRPVAAAQL 626