Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1092 a.a., histidine kinase from Pseudomonas fluorescens FW300-N2C3

 Score =  356 bits (914), Expect = e-102
 Identities = 192/434 (44%), Positives = 273/434 (62%), Gaps = 9/434 (2%)

Query: 234  AESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHSTGVLFYLDLDRFKTINDSLGH 293
            AE+++  LAY+DSLT L NR+LL+ +LS  I   +  +  G L +LDLD FK INDSLGH
Sbjct: 653  AEAQIRHLAYHDSLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHINDSLGH 712

Query: 294  TIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIPYLSPAKAEEVAKQ-------LLT 346
             +GD ++K +  R+EA  + +   AR+GGDEF VL+  L  +++E V+KQ       L  
Sbjct: 713  PVGDTVLKIITARLEASVRLEDTVARLGGDEFVVLLSGLEGSRSE-VSKQVQALADTLRE 771

Query: 347  LISNPYAVDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTALYRAKASGRNKFMFYEPEM 406
            L+S P  +D  +   T SIGI++ P  GS   D+L++AD ALYRAK SGRN    +   M
Sbjct: 772  LLSEPMFLDGQRLQVTPSIGIALIPDHGSTPTDLLKRADIALYRAKDSGRNTSQMFHTTM 831

Query: 407  QAQVESFLEIEKGLHEALNQRQLELFYQPQVDEQHN-IIGVEALIRWNHPKRGLLPPGVF 465
            Q      L +E  L  AL + +  + +QPQVD + N IIG EAL+RW+HP  G   P  F
Sbjct: 832  QKAASERLRMETDLRLALARGEFSVHFQPQVDARDNRIIGAEALVRWHHPDLGAQSPNEF 891

Query: 466  MPIAEETGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRLAINISPLQFAQESFIEQVN 525
            + + E++G IL +G WI+++AC  + Q   +G + P    L +NISP QF Q  F+E++ 
Sbjct: 892  IKVLEDSGLILEVGTWILDEACDGFKQLIAKGKIDPQRFSLCVNISPRQFRQSDFVERIE 951

Query: 526  HALRQAGITGEPIELEITESLLLENVESAIEKMAKLKESQISISIDDFGTGYSSLRYLKH 585
            ++L   G+    ++LEITE ++++N++  I KM +LK+  +S ++DDFGTGYSSL YLK 
Sbjct: 952  NSLAAHGLPCSLLKLEITEGIVIQNLDDTIAKMRRLKKLGVSFAMDDFGTGYSSLTYLKR 1011

Query: 586  LAVDVLKIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIAEGVEDTSELAALKKLGCN 645
            L VD LKID+SFV     D ND  I+  I+A+AR LNL +IAEGVE   +L  L+ L C+
Sbjct: 1012 LPVDTLKIDQSFVRDATSDPNDAEIIRAIVAMARSLNLVMIAEGVETLEQLHFLQGLDCH 1071

Query: 646  QFQGYLFDKPLRAE 659
             +QGYL  +PL  E
Sbjct: 1072 LYQGYLHSRPLPLE 1085