Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1282 a.a., diguanylate phosphodiesterase from Pseudomonas fluorescens FW300-N2C3

 Score =  363 bits (931), Expect = e-104
 Identities = 192/463 (41%), Positives = 292/463 (63%), Gaps = 11/463 (2%)

Query: 215  DELSELAS--TFQSMWKGKELAESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHS 272
            D+  +LAS   F S    ++ +E ++++LAYYD+LT L NR+L   +L  A+++A+   +
Sbjct: 818  DDEGDLASYVCFFSDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLHTALQSAERQKT 877

Query: 273  TGVLFYLDLDRFKTINDSLGHTIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLI-PY 331
              VL +LDLDRFK INDSLGH  GD+++K +A R+     +D   AR+GGDEF +L+ P 
Sbjct: 878  WVVLMFLDLDRFKPINDSLGHAAGDRMLKEMATRLLGCVADDDTVARMGGDEFTLLLQPR 937

Query: 332  LSPA----KAEEVAKQLLTLISNPYAVDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTA 387
             S      +A  VA+Q+L  +  P+ ++  +F+ T SIGI++ P  G+    +++ ADTA
Sbjct: 938  ASRETALNRAIAVAEQILASLVRPFVLEGREFFVTASIGIALSPQDGNELSQLMKNADTA 997

Query: 388  LYRAKASGRNKFMFYEPEMQAQVESFLEIEKGLHEALNQRQLELFYQPQVD-EQHNIIGV 446
            +Y AK  G+N F FY+ +M A     LE+E  L  AL Q +  L+YQPQ   +   + G 
Sbjct: 998  MYHAKERGKNNFQFYQADMNASALERLELESDLRHALEQNEFVLYYQPQFSGDGKRLTGA 1057

Query: 447  EALIRWNHPKRGLLPPGVFMPIAEETGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRL 506
            EAL+RW HP+RGL+PPG F+P+ EE G ++ +G+W+I +AC Q   W +  +  P   ++
Sbjct: 1058 EALLRWRHPRRGLVPPGDFIPVLEELGLVVDVGDWVITEACRQLRTWHQAKVRVP---KV 1114

Query: 507  AINISPLQFAQESFIEQVNHALRQAGITGEPIELEITESLLLENVESAIEKMAKLKESQI 566
            ++NIS  QF+      ++ + LR  G+    +ELE+TES+L+  V  A++ +A LK   +
Sbjct: 1115 SVNISARQFSDGQLGTRIANILRSTGLPPACLELELTESILMREVSEAMQILAGLKNLGL 1174

Query: 567  SISIDDFGTGYSSLRYLKHLAVDVLKIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVI 626
            SI++DDFGTGYSSL YLK   +DVLKIDR+FV+ L   + D  I   I+A+A  LNL VI
Sbjct: 1175 SIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVI 1234

Query: 627  AEGVEDTSELAALKKLGCNQFQGYLFDKPLRAEEIAQRFVSNS 669
            AEGVE   +L  L++ GC++ QGYLF +P+ A     +F +++
Sbjct: 1235 AEGVETHEQLDFLREHGCDEVQGYLFGRPMPANRFEAQFSNDA 1277