Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1247 a.a., diguanylate cyclase from Pseudomonas fluorescens FW300-N2C3

 Score =  342 bits (876), Expect = 8e-98
 Identities = 175/435 (40%), Positives = 271/435 (62%), Gaps = 5/435 (1%)

Query: 234  AESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHSTGVLFYLDLDRFKTINDSLGH 293
            A+++L+  A++D LTGL NR+L   +L  A+   Q +   G + +LDLDRFK INDSLGH
Sbjct: 799  AQARLDYQAHHDPLTGLPNRTLFESRLLAALNGQQENGGQGAVLFLDLDRFKHINDSLGH 858

Query: 294  TIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIPYLS-PAKAEEVAKQLLTLISNPY 352
             +GD L+K +A+R+    ++    AR+GGDEF +L+P L  P+ AE +A++LL   + P+
Sbjct: 859  PVGDLLLKGIAVRLREQLRDIDTVARLGGDEFIILLPGLQQPSDAEHIAQKLLNCFTAPF 918

Query: 353  AVDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTALYRAKASGRNKFMFYEPEMQAQVES 412
               +H+F+ + SIG S++P  G     +++ AD A+YR+KA GRN+   Y  ++ AQ   
Sbjct: 919  QAGEHEFFISASIGTSLYPQDGCDVATLVKNADAAMYRSKAKGRNRVESYTRDLTAQASE 978

Query: 413  FLEIEKGLHEALNQRQLELFYQPQVDEQHN-IIGVEALIRWNHPKRGLLPPGVFMPIAEE 471
             + +E  L  A+ + +L L +QP++    N ++G EALIRW HP  G +PP  F+P+AEE
Sbjct: 979  RVALEHELRRAIERNELSLSFQPKISLADNRLVGAEALIRWYHPTFGDVPPEHFIPLAEE 1038

Query: 472  TGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRLAINISPLQFAQESFIEQVNHALRQA 531
             G IL IG+W++E+AC Q  +W            L++N++  Q  Q + + ++   LR+ 
Sbjct: 1039 NGMILQIGDWVLERACRQLCEWNSTY---ESLGSLSVNLAGAQLRQPNLLGRIEQLLREH 1095

Query: 532  GITGEPIELEITESLLLENVESAIEKMAKLKESQISISIDDFGTGYSSLRYLKHLAVDVL 591
             +  + ++LEITE+ ++   E A+  + +LK   + ++IDDFGTGYSSL YLK L +D+L
Sbjct: 1096 QLRPDLLQLEITENFIMSQAEEALTVLHQLKNLGVQLAIDDFGTGYSSLSYLKRLPLDIL 1155

Query: 592  KIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIAEGVEDTSELAALKKLGCNQFQGYL 651
            KID+SFV  L  D +D AIV  I+A+ R +   +IAEGVE  ++   L + GC Q QGY+
Sbjct: 1156 KIDQSFVRGLPDDPHDAAIVRAIIALGRSMQFTIIAEGVETLAQQQFLAEEGCEQIQGYI 1215

Query: 652  FDKPLRAEEIAQRFV 666
               PL A+E A  F+
Sbjct: 1216 VSLPLCADEFAATFL 1230