Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 693 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N1B4

 Score =  330 bits (847), Expect = 1e-94
 Identities = 171/439 (38%), Positives = 261/439 (59%), Gaps = 8/439 (1%)

Query: 234 AESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHSTGVLFYLDLDRFKTINDSLGH 293
           A  +L QLA +D+LTGL NR LL  ++  A+   Q       L ++DLD FK +ND+ GH
Sbjct: 255 ANRELTQLALHDTLTGLPNRVLLADRIDQAMSRVQEQGGCFALMFIDLDGFKPVNDAFGH 314

Query: 294 TIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIPYLSPAKAEEVAKQLLTLISNPYA 353
            +GDQL++ V LR+    ++    ARIGGDEF +L+    P  A  +A + + LI+  + 
Sbjct: 315 HMGDQLLREVGLRLREDLRSQDTLARIGGDEFVLLVQLAEPNDALNLAARQVGLIARSFR 374

Query: 354 VDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTALYRAKASGRNKFMFYEPEMQAQVESF 413
           V +H    + S+GI+++P  G    ++L  AD A+Y AK +G+N   F++  M +     
Sbjct: 375 VAEHDLQISASVGIALYPGNGQTAEELLMNADAAMYHAKGAGKNGHSFFDASMNSNARKQ 434

Query: 414 LEIEKGLHEALNQRQLELFYQPQVDEQH-NIIGVEALIRWNHPKRGLLPPGVFMPIAEET 472
           L++ + L  AL+Q+Q  L+YQP+ D  H   +G EAL+RW HP +G+L P  F+ +AE+T
Sbjct: 435 LQLLQDLRNALDQQQFSLYYQPKFDAGHGRPVGAEALLRWEHPTQGMLQPDSFIDLAEKT 494

Query: 473 GQILPIGNWIIEQACYQYAQWKKQGILPPHFRRLAINISPLQFAQESFIEQVNHALRQAG 532
           G I+PIG W++ +AC Q  +W   G       R+A+N+S LQF     ++ V  AL    
Sbjct: 495 GLIIPIGEWVLNEACRQMREWYVLGYTD---WRIAVNLSALQFCHAGLVQSVAKALATHH 551

Query: 533 ITGEPIELEITESLLLENVESAIEKMAKLKESQISISIDDFGTGYSSLRYLKHLAVDVLK 592
           +    + LEITE+  + + ++++  + +L +  + +SIDDFGTGYSSL YLK L  + LK
Sbjct: 552 LPANSLTLEITETTAMSDADASMTVLQELSDMGVDLSIDDFGTGYSSLMYLKRLPANELK 611

Query: 593 IDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIAEGVEDTSELAALKKLGCNQFQGYLF 652
           IDR FV  L  D +D AIV  I+A+ + L L ++AEGVE   +   L +LGC+  QGYL 
Sbjct: 612 IDRGFVRDLEHDSDDAAIVSAIVALGQALGLRIVAEGVETGVQQDFLTQLGCDSLQGYLL 671

Query: 653 DKPLRAEEIAQRFVSNSYR 671
             PL A+    RF+++ +R
Sbjct: 672 GHPLPAD----RFMADIHR 686