Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1085 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N1B4

 Score =  369 bits (947), Expect = e-106
 Identities = 193/434 (44%), Positives = 276/434 (63%), Gaps = 7/434 (1%)

Query: 234  AESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHSTGVLFYLDLDRFKTINDSLGH 293
            AE+++  LAY+D LT L NR+LL+ +LS  I   +  +  G L +LDLD FK INDSLGH
Sbjct: 646  AEAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALMFLDLDHFKHINDSLGH 705

Query: 294  TIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIPYLSPAKAE------EVAKQLLTL 347
             +GD ++K +  R+EA  + +   AR+GGDEF VL+  L  ++++      E+A  L  L
Sbjct: 706  PVGDTVLKIITARLEASVRMEDTVARLGGDEFVVLLSGLEGSRSDVSAQVRELADTLREL 765

Query: 348  ISNPYAVDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTALYRAKASGRNKFMFYEPEMQ 407
            +S P  +D  +   T SIGI++ P  GS   D+L++AD ALYRAK SGRN    Y   MQ
Sbjct: 766  LSEPMFLDGQRLQVTPSIGIALIPDHGSTPTDLLKRADIALYRAKDSGRNTTQMYHNTMQ 825

Query: 408  AQVESFLEIEKGLHEALNQRQLELFYQPQVDEQHN-IIGVEALIRWNHPKRGLLPPGVFM 466
                  L +E  L  AL++ +  + YQPQVD ++N I G EAL+RW+HP+ G   P  F+
Sbjct: 826  KAASERLRMETDLRLALSRGEFSVQYQPQVDARNNRITGAEALVRWHHPQLGAQSPTEFI 885

Query: 467  PIAEETGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRLAINISPLQFAQESFIEQVNH 526
             + E++G IL +G WI+++AC  +     +G++ P    L +NISP QF Q  F+E++ H
Sbjct: 886  KVLEDSGLILEVGTWILDEACAAFKHLIAKGLINPLDFSLCVNISPRQFRQNDFVERIEH 945

Query: 527  ALRQAGITGEPIELEITESLLLENVESAIEKMAKLKESQISISIDDFGTGYSSLRYLKHL 586
            +L   G+    ++LEITE ++++N++  I KM +LK+  +S ++DDFGTGYSSL YLK L
Sbjct: 946  SLGSHGLPCSLLKLEITEGIVIQNLDDTISKMRRLKKLGVSFAMDDFGTGYSSLTYLKRL 1005

Query: 587  AVDVLKIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIAEGVEDTSELAALKKLGCNQ 646
             VD LKID+SF+     D ND  I+  I+A+AR L LEVIAEGVE   +LA L+ LGC+ 
Sbjct: 1006 PVDTLKIDQSFIRDATTDPNDAEIIRAIVAMARSLELEVIAEGVETLEQLAFLQGLGCHL 1065

Query: 647  FQGYLFDKPLRAEE 660
            +QGYL  +PL  EE
Sbjct: 1066 YQGYLHSRPLPVEE 1079