Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1185 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Acidovorax sp. GW101-3H11

 Score =  355 bits (911), Expect = e-102
 Identities = 190/448 (42%), Positives = 272/448 (60%), Gaps = 8/448 (1%)

Query: 234  AESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHSTGVLFYLDLDRFKTINDSLGH 293
            A  ++  LA+YD LT L NR L++ +L  A  T+  +   G L  LDLD FKT+ND+LGH
Sbjct: 740  AAREIEHLAFYDPLTHLPNRRLMMDRLQQAFATSARAGLQGALLCLDLDHFKTLNDTLGH 799

Query: 294  TIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIPYL------SPAKAEEVAKQLLTL 347
             +GD L++ VA R+    +     AR+GGDEF VL+  L      +  +A+ V +++L  
Sbjct: 800  DMGDVLLQQVAERLTRCVREGDTVARLGGDEFLVLLEDLGAQATDAAEQAQTVGEKILAA 859

Query: 348  ISNPYAVDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTALYRAKASGRNKFMFYEPEMQ 407
            ++ PY +  H  + T S+G  +F   G    DV++ AD A+Y AK +GRN   F++P MQ
Sbjct: 860  LNQPYQLASHHVHSTTSVGAVLFRGQGQTVEDVVKHADLAMYAAKTAGRNSIRFFDPRMQ 919

Query: 408  AQVESFLEIEKGLHEALNQRQLELFYQPQVDEQHNIIGVEALIRWNHPKRGLLPPGVFMP 467
            A V +   +E  L  A+ Q Q  L YQ QV     ++G EALIRWNHP RG++ P  F+P
Sbjct: 920  AAVTARATLENDLRTAVEQGQFTLHYQTQVGCGTRVVGAEALIRWNHPTRGMVSPFEFIP 979

Query: 468  IAEETGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRLAINISPLQFAQESFIEQVNHA 527
            +AEETG ILP+G W+++ AC Q  +W+          +LA+N+S  QF Q+ FIEQV   
Sbjct: 980  LAEETGLILPMGLWVLQTACTQLRRWQDHPATAE--LQLAVNVSARQFHQDDFIEQVVTV 1037

Query: 528  LRQAGITGEPIELEITESLLLENVESAIEKMAKLKESQISISIDDFGTGYSSLRYLKHLA 587
            LRQ G   + ++LE+TESL L+NV+  I KM  L+   +  S+DDFGTG SSL YL  L 
Sbjct: 1038 LRQTGARPDRLKLELTESLALDNVDDTIAKMNTLRALGLGFSMDDFGTGQSSLSYLTRLP 1097

Query: 588  VDVLKIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIAEGVEDTSELAALKKLGCNQF 647
            +D LKID+SFV  + +   D  IV TI+ +A+ L ++VIAEGVE  ++ A L++ GC  +
Sbjct: 1098 LDQLKIDQSFVRNIGIQHTDALIVQTIIGMAQSLGIDVIAEGVETEAQRAFLEQHGCTLW 1157

Query: 648  QGYLFDKPLRAEEIAQRFVSNSYRKIQT 675
            QGYLF +P+  E + QR  S    ++ T
Sbjct: 1158 QGYLFSRPVPIEVLEQRLHSGLGWQVST 1185