Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 894 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Acidovorax sp. GW101-3H11

 Score =  357 bits (916), Expect = e-102
 Identities = 182/434 (41%), Positives = 267/434 (61%), Gaps = 8/434 (1%)

Query: 234 AESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHSTGVLFYLDLDRFKTINDSLGH 293
           A +++  LA+YD LT L NR LL+ ++  AI ++  S   G L +LDLD FKT+ND+ GH
Sbjct: 445 ASAEIENLAFYDPLTNLPNRRLLMDRMQQAIASSARSGQYGALLFLDLDHFKTLNDTRGH 504

Query: 294 TIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIPYLSPAKAE------EVAKQLLTL 347
            +GD L++ VA R++   + +   AR+GGDEF V++  LS +  E       V +++L  
Sbjct: 505 EVGDMLLRQVAQRLKTCVRREDTVARLGGDEFVVMLSDLSASSEEAGAHVRRVGEKILRK 564

Query: 348 ISNPYAVDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTALYRAKASGRNKFMFYEPEMQ 407
           ++ PY +  H  + T SIG ++       ++D+L+QAD A+Y+ K+ GRN   F++P+MQ
Sbjct: 565 LNVPYTLGGHAHHSTPSIGATLMGGAIQSSVDLLKQADIAMYQVKSQGRNALCFFDPQMQ 624

Query: 408 AQVESFLEIEKGLHEALNQRQLELFYQPQVDEQHNIIGVEALIRWNHPKRGLLPPGVFMP 467
             +    ++E  L  AL  RQ  L YQPQ      ++G E LIRW HP+RGL+ PG F+ 
Sbjct: 625 ISISLRAQLEADLQAALTARQFVLHYQPQFHLDGRMVGAEGLIRWQHPERGLVAPGAFIG 684

Query: 468 IAEETGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRLAINISPLQFAQESFIEQVNHA 527
           +AEE+  I+P+G+W++  AC Q A W  QG       +L++N+S  QF Q  F+ +V   
Sbjct: 685 VAEESELIVPMGHWVLRTACEQLAAW--QGNPRLQHLQLSVNVSARQFRQRDFVARVVEV 742

Query: 528 LRQAGITGEPIELEITESLLLENVESAIEKMAKLKESQISISIDDFGTGYSSLRYLKHLA 587
           LR+ G     ++LE+TESL+L+NV+  I K+  LK   +  S+DDFGTGYSSL YL  L 
Sbjct: 743 LRETGARPHLLKLELTESLVLDNVDDTIAKIGTLKTKGVRFSVDDFGTGYSSLAYLTRLP 802

Query: 588 VDVLKIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIAEGVEDTSELAALKKLGCNQF 647
           +D LKID+SFV+ L +   D  IV TIL +AR L L+VIAEGVE  ++   L + GC  F
Sbjct: 803 LDQLKIDQSFVHNLGVRHTDDVIVQTILGMARNLELDVIAEGVETEAQKKLLAQYGCTYF 862

Query: 648 QGYLFDKPLRAEEI 661
           QGYL  +P+   E+
Sbjct: 863 QGYLMGRPVPVAEL 876