Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 828 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Pseudomonas syringae pv. syringae B728a

 Score =  357 bits (916), Expect = e-102
 Identities = 192/455 (42%), Positives = 282/455 (61%), Gaps = 6/455 (1%)

Query: 214 DDELSELASTFQSMWKGKELAESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHST 273
           D+ L+   + F  +   K+ A+++L+  A++D LTGL NR L   +L  A+  ++ S S 
Sbjct: 361 DNLLTHFVAVFADISSLKQ-AQARLDYQAHHDPLTGLPNRILFESRLQAALLHSEESGSL 419

Query: 274 GVLFYLDLDRFKTINDSLGHTIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIP-YL 332
           G + +LDLDRFK INDSLGH +GD L+K +A R++   ++    AR+GGDEF VL+P  L
Sbjct: 420 GAVLFLDLDRFKHINDSLGHPVGDLLLKGIAHRLKETLRDIDTVARLGGDEFIVLLPGLL 479

Query: 333 SPAKAEEVAKQLLTLISNPYAVDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTALYRAK 392
             + A+ +A +LL   S P+   +H+ Y + SIG  VFP+ G+    +++ AD A+YR+K
Sbjct: 480 QTSDAQAIANKLLACFSTPFEAGEHELYISPSIGSCVFPTDGTDVATLVKNADAAMYRSK 539

Query: 393 ASGRNKFMFYEPEMQAQVESFLEIEKGLHEALNQRQLELFYQPQVDE-QHNIIGVEALIR 451
           A GRN+   Y  ++  Q    + +E+ L  AL + QL L YQP++D   H + G EALIR
Sbjct: 540 AKGRNRVESYTCDLSDQASERIALEQELRRALERNQLTLAYQPKIDLLTHTMAGAEALIR 599

Query: 452 WNHPKRGLLPPGVFMPIAEETGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRLAINIS 511
           WNHP  G +PP  F+P+AEE G IL IG+W++EQAC Q   W+K       F  L++N++
Sbjct: 600 WNHPTFGEVPPEHFIPLAEENGMILQIGDWVLEQACRQMGIWRKTC---QPFGPLSVNLA 656

Query: 512 PLQFAQESFIEQVNHALRQAGITGEPIELEITESLLLENVESAIEKMAKLKESQISISID 571
             Q  Q + +E++   L   G+    ++LEITE+ ++   + A+  + +LK   + ++ID
Sbjct: 657 GAQLRQTNLLERIEQLLTDNGLEPGCLQLEITENFIMSQTQEALAVLHQLKTLGVQLAID 716

Query: 572 DFGTGYSSLRYLKHLAVDVLKIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIAEGVE 631
           DFGTGYSSL YLK L +D+LKID+SFV  L  D +D AIV  I+A+ R L L VIAEGVE
Sbjct: 717 DFGTGYSSLSYLKRLPLDILKIDQSFVRGLPEDTHDAAIVRAIIALGRSLQLTVIAEGVE 776

Query: 632 DTSELAALKKLGCNQFQGYLFDKPLRAEEIAQRFV 666
           ++ +   L   GC Q QGY+   PL AEE   RF+
Sbjct: 777 NSEQQQFLTSEGCEQIQGYIISLPLDAEEFRARFL 811



 Score = 27.7 bits (60), Expect = 0.002
 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 4/55 (7%)

Query: 59  NASQAAYHLNNLLA--EQVATTLMLDPGIFKVEIVDDFGDVMTRKEKAISEQSQL 111
           N + A     NLL   EQ+ T   L+PG  ++EI ++F  +M++ ++A++   QL
Sbjct: 654 NLAGAQLRQTNLLERIEQLLTDNGLEPGCLQLEITENF--IMSQTQEALAVLHQL 706