Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1278 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Pseudomonas syringae pv. syringae B728a

 Score =  361 bits (926), Expect = e-103
 Identities = 190/466 (40%), Positives = 292/466 (62%), Gaps = 17/466 (3%)

Query: 215  DELSELAS--TFQSMWKGKELAESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHS 272
            D+  +LAS   F S    ++ +E ++++LAYYD+LT L NR+L   +L  A++ A+   +
Sbjct: 814  DDEGDLASYVCFFSDISERKASEDRIHRLAYYDALTHLPNRTLFQDRLHSALQHAERQQA 873

Query: 273  TGVLFYLDLDRFKTINDSLGHTIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIPYL 332
              VL +LDLDRFK INDSLGH  GD++++ +A R+ A    D   AR+GGDEF +L   L
Sbjct: 874  WVVLMFLDLDRFKPINDSLGHAAGDRMLQEMATRLLACVSVDDTVARMGGDEFTLL---L 930

Query: 333  SPAKAEE--------VAKQLLTLISNPYAVDDHQFYCTVSIGISVFPSVGSCNIDVLRQA 384
             P ++ E        VA+++LT +  P+ ++  +F+ T SIGI++ P  G     +++ A
Sbjct: 931  EPDESREAALNRAIHVAERILTSLITPFVLEGREFFVTASIGIALSPQDGKELSQLMKNA 990

Query: 385  DTALYRAKASGRNKFMFYEPEMQAQVESFLEIEKGLHEALNQRQLELFYQPQVD-EQHNI 443
            DTA+Y AK  G+N F FY+ +M A     LE+E  L  AL Q++  LFYQPQ   +   +
Sbjct: 991  DTAMYHAKERGKNNFQFYQADMNATALERLELESDLRHALEQKEFTLFYQPQFSGDGKRL 1050

Query: 444  IGVEALIRWNHPKRGLLPPGVFMPIAEETGQILPIGNWIIEQACYQYAQWKKQGILPPHF 503
             G EAL+RW HP+RGL+PP  F+P+ EE G ++ +G+W++ +AC Q   W +  +  P  
Sbjct: 1051 TGAEALLRWRHPRRGLVPPNDFIPVLEELGLVVEVGDWVLAEACRQLKHWHQARVRVP-- 1108

Query: 504  RRLAINISPLQFAQESFIEQVNHALRQAGITGEPIELEITESLLLENVESAIEKMAKLKE 563
             ++++NIS  QF+     +++ H L QAG++   +ELE+TES+L+  V  A++ +  LK 
Sbjct: 1109 -KVSVNISARQFSDGQLGKRIAHILEQAGLSPACLELELTESILMREVNEAMQILDGLKN 1167

Query: 564  SQISISIDDFGTGYSSLRYLKHLAVDVLKIDRSFVNQLHLDDNDQAIVDTILAIARKLNL 623
              +SI++DDFGTGYSSL YLK   +DVLKIDR+FV+ L   + D  I   I+A+A  LNL
Sbjct: 1168 LGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFVDGLPSGEQDAQIARAIIAMAHSLNL 1227

Query: 624  EVIAEGVEDTSELAALKKLGCNQFQGYLFDKPLRAEEIAQRFVSNS 669
             VIAEGVE   +L  L++  C++ QGYLF +P+   +   +F +++
Sbjct: 1228 SVIAEGVETHEQLEFLREHDCDEVQGYLFGRPMPPAQFEAQFSNDA 1273