Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 929 a.a., response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Synechococcus elongatus PCC 7942

 Score =  333 bits (855), Expect = 2e-95
 Identities = 177/442 (40%), Positives = 273/442 (61%), Gaps = 7/442 (1%)

Query: 235 ESKLNQLAYYDSLTGLANRSLLLQKLSDAIETA-QNSHSTGVLFYLDLDRFKTINDSLGH 293
           E +L+  A +D LTGL NR++L  +L    + A +  HS  +LF +DLD FK INDS+GH
Sbjct: 491 EEELSFSASHDVLTGLPNRAVLEDRLRQGCKMALRQKHSLAILF-IDLDGFKLINDSIGH 549

Query: 294 TIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIPYLSPAK-AEEVAKQLLTLISNPY 352
             GD L+  VA RM    +     ARIGGDEF +L+  L        +A +LL  ++ PY
Sbjct: 550 RSGDLLLVEVAQRMCEQVRAGDTVARIGGDEFIILLVDLKLENDVISIADRLLASVARPY 609

Query: 353 AVDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTALYRAKASGRNKFMFYEPEMQAQVES 412
            +     + T S+GI++          +++QAD A+Y+AK  GRN + +Y  ++  ++  
Sbjct: 610 HIQGIYLHVTASMGITLSDGDIEQPTQLIQQADLAMYKAKQEGRNNYQWYTNDLNLRLRE 669

Query: 413 FLEIEKGLHEALNQRQLELFYQPQVDE-QHNIIGVEALIRWNHPKRGLLPPGVFMPIAEE 471
            + +   L +A+     EL++QP+++     +IG+EAL+RW HP+ G + P  F+PIAE+
Sbjct: 670 RVHLRNELQKAIETEAFELYFQPKIEGCSGQVIGLEALLRWQHPQMGFISPATFVPIAED 729

Query: 472 TGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRLAINISPLQFAQESFIEQVNHALRQA 531
           TGQI+P+  W++E AC Q     +QGI  P    +A+NIS +QF + +F++ V  AL++ 
Sbjct: 730 TGQIIPLSQWVLETACRQLRDLLQQGIAAPS---VAVNISTVQFRRINFVKSVQSALQKY 786

Query: 532 GITGEPIELEITESLLLENVESAIEKMAKLKESQISISIDDFGTGYSSLRYLKHLAVDVL 591
            +  E +E+EITE++L +N E AIEK+ +LKE  ++ISIDDFGTG+SSL YLK L +D +
Sbjct: 787 QLKSEHLEIEITENVLFDNTEKAIEKLQRLKELGVNISIDDFGTGFSSLSYLKELPIDTV 846

Query: 592 KIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIAEGVEDTSELAALKKLGCNQFQGYL 651
           KIDRSFV +++ D  D AI   I+++A  L L V+AEGVE   +   L++  C+Q+QGY 
Sbjct: 847 KIDRSFVQEINTDSRDAAITQGIISMAHHLRLNVVAEGVETEQQFKFLQQSNCDQYQGYY 906

Query: 652 FDKPLRAEEIAQRFVSNSYRKI 673
           F KP+  E + Q  +  + R++
Sbjct: 907 FAKPMPFEALKQYLMDEAAREL 928