Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 855 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  336 bits (862), Expect = 2e-96
 Identities = 170/427 (39%), Positives = 259/427 (60%), Gaps = 4/427 (0%)

Query: 235 ESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHSTGVLFYLDLDRFKTINDSLGHT 294
           E  +   A +D LT L NR L++ +L  A+  AQ +     + +LDLDRFK INDS GH+
Sbjct: 406 EEHIRFQANFDMLTHLPNRHLIMDRLEQAMHQAQRTGRQVCVMFLDLDRFKQINDSYGHS 465

Query: 295 IGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIPYLSPAKAEE-VAKQLLTLISNPYA 353
            GD+++K  A R+    +      R+GGDEF V++  +    A   +A+++L  +S P+ 
Sbjct: 466 AGDEVLKLTARRLRNCVRISDSVGRLGGDEFIVILSNVEDQHAGAYIAEKILYSLSEPFP 525

Query: 354 VDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTALYRAKASGRNKFMFYEPEMQAQVESF 413
           +   + +C  S+GI+ FP  G    D+LR AD A+Y AK  G  ++  + P+M  +  + 
Sbjct: 526 IGGTEVFCIPSVGITYFPDHGETAPDLLRNADVAMYHAKQGGERRYAIFTPDMARRSLAL 585

Query: 414 LEIEKGLHEALNQRQLELFYQPQVDEQHNIIGVEALIRWNHPKRGLLPPGVFMPIAEETG 473
           L +E  L  AL + + EL +QP+V     +IG EALIRW HP++GL+ PG F+P+AEE+G
Sbjct: 586 LTMESDLRHALARDEFELHFQPKVRADLTLIGAEALIRWRHPEKGLINPGDFIPLAEESG 645

Query: 474 QILPIGNWIIEQACYQYAQWKKQGILPPHFRRLAINISPLQFAQESFIEQVNHALRQAGI 533
            ILPIG W + +AC +   W+ +G+  P    +++N+SP QF  ++ +E V   L + G+
Sbjct: 646 LILPIGRWTLREACDRVMSWRAEGLTIP---SVSVNVSPRQFQDQTLVETVRQILVETGL 702

Query: 534 TGEPIELEITESLLLENVESAIEKMAKLKESQISISIDDFGTGYSSLRYLKHLAVDVLKI 593
             E ++LEITE+++  +VE A+  +  LK+  +++SIDDFGTGYSSL YLK   +D LKI
Sbjct: 703 EPEALDLEITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSSLNYLKTFPIDTLKI 762

Query: 594 DRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIAEGVEDTSELAALKKLGCNQFQGYLFD 653
           D++FV  +     D AIV TI+A+AR L   V+AEGVE+  +   L    C  FQG+L+ 
Sbjct: 763 DQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQGFLYS 822

Query: 654 KPLRAEE 660
           +PL   E
Sbjct: 823 RPLPPAE 829