Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 677 a.a., diguanylate cyclase/phosphodiesterase (RefSeq) from Shewanella loihica PV-4

 Score =  342 bits (876), Expect = 4e-98
 Identities = 207/637 (32%), Positives = 349/637 (54%), Gaps = 20/637 (3%)

Query: 52  KLVQSYEN-ASQAAYHLNNLLAEQVATTLMLDPGIFKVEIVDDFGDVMTRKEKAISEQSQ 110
           +L+ S E  A+ A + L++ LA Q    ++    + +  I  D G +        ++ + 
Sbjct: 49  ELLDSIEQPAANAVWALDDNLATQTLEGVLKVEHVGEAVIELDDGSMFVSMNNPFTD-NP 107

Query: 111 LVSVLASYLTPAVSVFSAELHQPN------SNVVVGKLSFYIDGSSIAKVFIAKTTRVLL 164
           LV  L+  L   +   S  L++P+         ++G L+ + +   +     ++     L
Sbjct: 108 LVRKLSEKLFGDLKQISRTLYRPSFFEGTEKQQIIGTLTIFYNTQELTDSLFSQLRFSFL 167

Query: 165 FDLLRNTLLTTILLLFFYQKLSRPITMLITWVNSLNDT--QRSPLPLRLTH-DDELSELA 221
             L R  L+T  L + F++ L++PI  +   ++ ++      + LP    H DDEL  + 
Sbjct: 168 ATLARALLVTMALSIIFHRFLTKPIAQISEAIDKIDPELPDENLLPTSTAHQDDELGLVT 227

Query: 222 STFQSMWKGKELAESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHSTGVLFYLDL 281
           S F  +       +SKL ++A  D LTGL NR+LLL+ ++ +I+ A+       + ++DL
Sbjct: 228 SKFNQILIQFGQTQSKLRRMATRDPLTGLPNRTLLLETIAVSIQRARVHKHQFTMLFIDL 287

Query: 282 DRFKTINDSLGHTIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLI-PYLSPAKAEEV 340
           DRFK +NDSLGH +GDQ +  +A  +E    +    AR+GGDEF +L     +P +A + 
Sbjct: 288 DRFKNVNDSLGHALGDQFLARIARVLERVVGDRGTVARLGGDEFVILAEDARTPDQAADF 347

Query: 341 AKQLLTLISNPYAVDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTALYRAKASGRNKFM 400
             +LL  ++ P  +++H  +   S+GIS++P  G    D++R AD A+Y AKA+G N++ 
Sbjct: 348 VDKLLMQLNVPLQLNEHTIHPAASVGISIYPDDGLSAEDLIRHADIAMYSAKAAGSNQWA 407

Query: 401 FYEPEMQAQVESFLEIEKGLHEALNQRQLELFYQPQVD-EQHNIIGVEALIRWNHPKRGL 459
           F++ +M  +    L  E  LH+AL   +  L +QP+ + +   +I  EALIRW    R L
Sbjct: 408 FFKQQMTERAAVRLRTEASLHDALKNNEFLLHFQPKFNIKTGKVIACEALIRWKKDGR-L 466

Query: 460 LPPGVFMPIAEETGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRLAINISPLQFAQES 519
           + P  F+P+AEETG I+P+G W+IE+AC     W+K+     +   +A+N++  QFA  S
Sbjct: 467 ISPMSFIPVAEETGIIIPLGRWVIEEACRTLKHWRKR---YNYAIPIAVNVASQQFADAS 523

Query: 520 FIEQVNHALRQAGITGEPIELEITESLLLENVESAIEKMAKLKESQISISIDDFGTGYSS 579
            +  +     +  I    +E+EITE+ L+ ++E AI K+ +LK +   I++DDFGTGYSS
Sbjct: 524 LVPDIKQLALRYQIDPSLLEVEITETSLMNDIELAIHKLEQLKGAGFGIAVDDFGTGYSS 583

Query: 580 LRYLKHLAVDVLKIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIAEGVEDTSELAAL 639
           L YL+HL +  +KIDR FV  L    N+ AI  TIL + ++LNL ++AEG+E+  +L  L
Sbjct: 584 LSYLRHLPITTMKIDRCFVTDL---PNESAIASTILMLGKQLNLHIVAEGIENEQQLNWL 640

Query: 640 KKLGCNQFQGYLFDKPLRAEEIAQRFVSNSYRKIQTL 676
           K++ C   QG+ + +PL   E   R+++ +   I  +
Sbjct: 641 KQMDCEIGQGFYYSQPLDISEFENRYIAPNNASISQI 677