Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1281 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  350 bits (897), Expect = e-100
 Identities = 194/464 (41%), Positives = 285/464 (61%), Gaps = 18/464 (3%)

Query: 196  VNSLNDTQRSPLPLRLTHDDELSELASTFQSMWKGKELAESKLNQLAYYDSLTGLANRSL 255
            +N+++DTQ   L   +T   +++E   T           E++++ LA++D LTGL NR  
Sbjct: 816  INAVHDTQSGALTHYITLFSDITERKET-----------EARIHHLAHHDPLTGLPNRFT 864

Query: 256  LLQKLSDAIETAQ-NSHSTGVLFYLDLDRFKTINDSLGHTIGDQLIKAVALRMEAWTKND 314
            L  +L  ++  A+ + H   V+F +DLDRFKTINDSLGH +GD L+  +A R+ +  +  
Sbjct: 865  LEARLEQSLADARRHGHKVAVMF-MDLDRFKTINDSLGHAVGDSLLMEIAHRLRSAVRES 923

Query: 315  YLSARIGGDEFAVLIPYLSPAK-AEEVAKQLLTLISNPYAVDDHQFYCTVSIGISVFPSV 373
               AR+GGDEF V++P +  A  A  VA +++  ++    V  H+ + + SIGIS++P  
Sbjct: 924  DTVARLGGDEFVVVLPDVEGANDAAHVAGKIIEDVARSLRVGAHELHTSASIGISLYPDD 983

Query: 374  GSCNIDVLRQADTALYRAKASGRNKFMFYEPEMQAQVESFLEIEKGLHEALNQRQLELFY 433
            G     V++ ADTA+Y AKA GRN F F+   M       LE+E+ L +A+   +LEL +
Sbjct: 984  GETVPTVMQNADTAMYHAKAIGRNNFQFFASAMNRAATERLELERKLRQAMVNDELELHF 1043

Query: 434  QPQVD-EQHNIIGVEALIRWNHPKRGLLPPGVFMPIAEETGQILPIGNWIIEQACYQYAQ 492
            QPQ       + GVEAL+RW HP+ GL+PP  F+PIAEETG I+ IG+W+++ AC Q   
Sbjct: 1044 QPQFALAADRVTGVEALLRWRHPEDGLIPPDRFIPIAEETGLIVGIGDWVLQAACRQLKA 1103

Query: 493  WKKQGILPPHFRRLAINISPLQFAQESFIEQVNHALRQAGITGEPIELEITESLLLENVE 552
            W  QG LPP   R+A+N+S  Q  ++ F  +V   L++ G+    +ELEITES ++E  E
Sbjct: 1104 WLDQG-LPP--LRMAVNLSTRQLKEKEFPSRVAAILQETGLPAVLLELEITESGVMERPE 1160

Query: 553  SAIEKMAKLKESQISISIDDFGTGYSSLRYLKHLAVDVLKIDRSFVNQLHLDDNDQAIVD 612
             AI  +  L +  ++++IDDFGTGYSSL YLK   +D LKIDRSFV  +  D +D AI  
Sbjct: 1161 EAITTLQALNDMGVTLAIDDFGTGYSSLSYLKLFPIDRLKIDRSFVRDIERDPDDAAIAR 1220

Query: 613  TILAIARKLNLEVIAEGVEDTSELAALKKLGCNQFQGYLFDKPL 656
              +A+A  L LEV+AEGVE +++L  L   GC++ QGY F +PL
Sbjct: 1221 GTIALAHSLGLEVVAEGVETSAQLDMLAADGCDEVQGYFFSRPL 1264