Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 686 a.a., sensory box sensor/GGDEF/EAL domain protein from Marinobacter adhaerens HP15

 Score =  331 bits (849), Expect = 6e-95
 Identities = 206/693 (29%), Positives = 349/693 (50%), Gaps = 39/693 (5%)

Query: 4   FRKIHSLAFKQAKSVFLVSVLLGLCFSFYHTLSDLHQEQSKVQEHYNFKLVQSYENASQA 63
           F   H L ++  + +  V++  G+  S    + D  +    +       +    + A+QA
Sbjct: 5   FEVEHRLGYRILRWILAVALASGVVVSAIQVILDAQRVSRGLDSDAKQTIAMVKDAATQA 64

Query: 64  AYHLNNLLAEQVATTLMLDPGIFKVEIVDDFGDVMTRKEKAISEQSQLVSVLASYLTPAV 123
            + ++  LA+QV   L     +    IV   GD +  + + + E +     +   +  A 
Sbjct: 65  VFSIDAELAQQVVDGLFAKEAVHMARIVHPDGDPLGDRSRPLQETA--FRPVTDPIFDAD 122

Query: 124 SVFSAEL-HQPNSNVVVGKLSFYIDGSSIAKVFIAKTTRVLLFDLLRNTLLTTILLLFFY 182
            ++   L  + N   V G L  + D ++ A+ ++ +        +    +L  +L   F+
Sbjct: 123 RLYREPLFREGNPEDVYGFLDVHYDTAAAARTWLDRAAVTFASGMATALILGMVLFYVFH 182

Query: 183 QKLSRPITMLITWVNSLNDTQRSPLPLRLTHDDELSELASTFQS----MW---------- 228
             L+RP+  ++  V  ++             DD L    S  QS    +W          
Sbjct: 183 LLLTRPLLRIVNSVRQVDPAHP---------DDRLVTTPSGHQSDELGLWVNATNNLLVA 233

Query: 229 -----KGKELAESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHSTGVLFYLDLDR 283
                K    AE ++++L+ YD LTGL +R   ++ L   IE A   ++   L    +D 
Sbjct: 234 IGDSQKRHREAEDRVSRLSRYDQLTGLPSRDTFMELLVRDIEDAARRNAQLSLIVCGIDD 293

Query: 284 FKTINDSLGHTIGDQLIKAVALRMEAWTKND-YLSARIGGDEFAVLIPYLSPA-KAEEVA 341
           FK++N+  G   GD +++ VA R+     N  +  AR+G D+F V+   L    +A + A
Sbjct: 294 FKSVNEQCGFRSGDLILQTVADRLTNKLDNARFTIARLGSDQFVVVQKGLRDGFQAADTA 353

Query: 342 KQLLTLISNPYAVDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTALYRAKASGRNKFMF 401
           +++L  ++ P  V+D     + ++G++++PS  S    +L+ A+  +  AK +G N F F
Sbjct: 354 ERILACVNEPMLVEDQNISISATLGVALYPSDTSKADRLLQSAEQTMTLAKQNGHNHFQF 413

Query: 402 YEPEMQAQVESFLEIEKGLHEALNQRQLELFYQPQVD-EQHNIIGVEALIRWNHPKRGLL 460
           Y   +  ++    ++EK L +AL   Q  L YQPQ++ E   +IG EAL+RW HP RG +
Sbjct: 414 YVASIDQEIRDRKQLEKDLSQALGNHQFHLVYQPQINLESKRVIGAEALLRWEHPTRGTV 473

Query: 461 PPGVFMPIAEETGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRLAINISPLQFAQESF 520
           PP  F+P+AE  G I+ IG W+++QAC+Q A+W   G       R+A+N+S +Q  QES 
Sbjct: 474 PPDFFIPVAEANGSIVEIGQWVLDQACWQAARWASDGSP----LRIAVNLSAVQLRQESI 529

Query: 521 IEQVNHALRQAGITGEPIELEITESLLLENVESAIEKMAKLKESQISISIDDFGTGYSSL 580
           ++ +   LR+  I    +ELE+TE+  + N+  A+ K+ +L ++ ISI++DDFGTGYSSL
Sbjct: 530 VDDILDTLRRHKIPAGRLELEVTETSFMTNLSDAVAKLHRLNKAGISIAVDDFGTGYSSL 589

Query: 581 RYLKHLAVDVLKIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIAEGVEDTSELAALK 640
            YLK + V  LKID+ F+  L +++ D  I +TI+ + + LNL V+AEGVE   +   L 
Sbjct: 590 TYLKQMPVQHLKIDKQFIRDLLVNEEDTRIANTIIDLGKSLNLSVVAEGVETAEQEYYLS 649

Query: 641 KLGCNQFQGYLFDKPLRAEEIAQRFVSNSYRKI 673
           + GC   QGY F KPL   E  + FV   + +I
Sbjct: 650 QRGCKLAQGYFFSKPLPPREF-ETFVKGFHEQI 681