Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1036 a.a., PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein from Paraburkholderia bryophila 376MFSha3.1

 Score =  338 bits (866), Expect = 1e-96
 Identities = 181/441 (41%), Positives = 266/441 (60%), Gaps = 5/441 (1%)

Query: 235  ESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHSTGVLFYLDLDRFKTINDSLGHT 294
            + +L   A YDSLT L NR+LL  +L  A+  AQ  H    + ++DLD FK +NDSLGH+
Sbjct: 596  QEQLEYQANYDSLTRLPNRNLLRDRLQHALIVAQRQHKGVAVVFMDLDGFKNVNDSLGHS 655

Query: 295  IGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIP-YLSPAKAEEVAKQLLTLISNPYA 353
            +GD+L+  VA R+   T+     AR GGDEF +++   +         +++   IS P  
Sbjct: 656  VGDRLLGVVAERLARCTRTSDTVARHGGDEFVIVMTDTVDEQSLIAWMERVRASISEPVW 715

Query: 354  VDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTALYRAKASGRNKFMFYEPEMQAQVESF 413
            +D  + Y   S+G S+FP  G     ++++AD A+YRAK  GRN F FY+PEM A   + 
Sbjct: 716  LDGTELYVGCSMGASLFPQDGDDAETLMKKADLAMYRAKDMGRNTFQFYQPEMNASAGAR 775

Query: 414  LEIEKGLHEALNQRQLELFYQPQVD-EQHNIIGVEALIRWNHPKRGLLPPGVFMPIAEET 472
            L +E+ L  AL   +  L YQPQVD +   I+G EAL+RW+ P+ GL+PP  F+P+AEE+
Sbjct: 776  LNLERRLRRALRDNEFLLHYQPQVDIDSGQIVGTEALVRWSDPEVGLVPPSSFIPVAEES 835

Query: 473  GQILPIGNWIIEQACYQYAQWKKQGILPPHFRRLAINISPLQFAQESFIEQVNHALRQAG 532
            G I P+  W++ +AC Q   W+  G LPP   R+++N+S   F Q    + V   L + G
Sbjct: 836  GLIGPLSEWVLREACRQNKAWQDLG-LPP--ARVSVNLSARVFQQRDIAKLVMQVLDETG 892

Query: 533  ITGEPIELEITESLLLENVESAIEKMAKLKESQISISIDDFGTGYSSLRYLKHLAVDVLK 592
            +  + +ELE+TES ++ N E A+  + +L    I ++IDDFGTGYSSL YLK   VD LK
Sbjct: 893  LEPQYLELELTESAIMRNAEEAVSMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLK 952

Query: 593  IDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIAEGVEDTSELAALKKLGCNQFQGYLF 652
            IDRSFV+ + +  +D+ I   I+A+A  L L+VIAEGVE +++L  LK+  C++ QG+ F
Sbjct: 953  IDRSFVSDIGISGDDETITSAIIALAHSLKLQVIAEGVETSAQLDFLKERACDEMQGFYF 1012

Query: 653  DKPLRAEEIAQRFVSNSYRKI 673
             KPL  E I       + R++
Sbjct: 1013 AKPLSTEAIYDLMQGGAAREL 1033