Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1228 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  336 bits (861), Expect = 5e-96
 Identities = 178/441 (40%), Positives = 277/441 (62%), Gaps = 5/441 (1%)

Query: 231  KELAESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHSTGVLFYLDLDRFKTINDS 290
            +++ E +++ LA++DSLT L NR  L  +L    + A  S +   + ++D+D FK IND+
Sbjct: 792  RKVNEERIHFLAHHDSLTLLPNRLSLQSRLEKVFQEAFISQTQIAVMFIDMDHFKNINDT 851

Query: 291  LGHTIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIPYLSPAKAEEVAKQLLTLISN 350
            LGH +GD L+  VA R++    ND + AR+GGDEF V++      +  +VA+ L + ++ 
Sbjct: 852  LGHHVGDMLLLEVARRLKNIMGNDDIVARLGGDEFVVVLSDTDHDRVAKVAEALRSGLNQ 911

Query: 351  PYAVDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTALYRAKASGRNKFMFYEPEMQAQV 410
             Y +D+   + + SIGIS+FP+ G     +++ AD A+YRAKA+GRN + F+   M   V
Sbjct: 912  TYLIDNKPLHSSPSIGISLFPTDGDSVEALMKNADMAMYRAKAAGRNNYQFFTAAMNTLV 971

Query: 411  ESFLEIEKGLHEALNQRQLELFYQPQVD-EQHNIIGVEALIRWNHPKRGLLPPGVFMPIA 469
                +IE GL +A+   +L L+YQPQVD     ++GVEALIRW HP+ GL+ P  F+PIA
Sbjct: 972  TERQQIETGLRQAIACNELLLYYQPQVDISSGQVVGVEALIRWQHPELGLVAPDRFIPIA 1031

Query: 470  EETGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRLAINISPLQFAQESFIEQVNHALR 529
            EE   I+PIG W++E A  Q A+W+ +G       R+A+N+S  Q  +++ +  + + L 
Sbjct: 1032 EEIDMIIPIGQWVLENALAQLAEWRDKG---AKGLRMAVNLSAHQLRKDTIVADIINVLT 1088

Query: 530  QAGITGEPIELEITESLLLENVESAIEKMAKLKESQISISIDDFGTGYSSLRYLKHLAVD 589
            +  +    +ELEITES+ ++  E   + +A+L++  I ++IDDFGTGYSSL YLK L +D
Sbjct: 1089 KHKLGKGALELEITESVAMQYPEQNAKLLAELRQHGIELAIDDFGTGYSSLSYLKLLPLD 1148

Query: 590  VLKIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIAEGVEDTSELAALKKLGCNQFQG 649
             LK+DRSFV  +  D ND AI    +++A +L L V+AEGVE+ ++L  L  +GC+  QG
Sbjct: 1149 RLKLDRSFVKDIESDPNDAAISAATISMAHELGLTVVAEGVENEAQLVLLSGMGCDLVQG 1208

Query: 650  YLFDKPLRAEEIAQRFVSNSY 670
            Y F KPL A++   RF+  ++
Sbjct: 1209 YYFSKPLAADD-CFRFIERNF 1228