Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1009 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  323 bits (828), Expect = 2e-92
 Identities = 171/439 (38%), Positives = 271/439 (61%), Gaps = 6/439 (1%)

Query: 231  KELAESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHSTGVLFYLDLDRFKTINDS 290
            K+ +E  + + A YD+LTGL NR +LL+ L   I++A  + +   L +LDLD FK +ND+
Sbjct: 570  KKQSEHLIWKQANYDTLTGLPNRRMLLEYLGAEIKSADRNRNHFALMFLDLDYFKEVNDT 629

Query: 291  LGHTIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIPYLSPAKA-EEVAKQLLTLIS 349
            LGH +GD L+   A R+++  ++  + AR+GGDEF V++  +   K  E VA+ +L  I+
Sbjct: 630  LGHAMGDLLLIETASRLKSCVRDADVVARLGGDEFTVVLSSMVDHKGIERVAEHILRRIA 689

Query: 350  NPYAVDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTALYRAKASGRNKFMFYEPEMQAQ 409
             PY + +   Y + SIGI+++P   +    +L+ AD A+Y AK  GRN+F ++ P MQ  
Sbjct: 690  EPYVLGEETAYISASIGITLYPDDATSIEGLLKHADQAMYAAKDQGRNRFNYFTPSMQEY 749

Query: 410  VESFLEIEKGLHEALNQRQLELFYQPQVD-EQHNIIGVEALIRWNHPKRGLLPPGVFMPI 468
             +  + + + L +A+  ++ EL YQP V      ++  EAL+RW HP+RG + P  F+P+
Sbjct: 750  AKYRMRLIQDLRQAVVSKEFELHYQPIVTMTTGEVLKAEALLRWFHPERGYVSPAEFIPV 809

Query: 469  AEETGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRLAINISPLQFAQE-SFIEQVNHA 527
            AE+TG I+ IGNW+ EQA  Q A W+K   +     ++++N SP+QF  E + +      
Sbjct: 810  AEDTGLIVEIGNWVFEQAARQSALWRKTFGVDI---QISVNKSPIQFRDEGTLLHNWLEL 866

Query: 528  LRQAGITGEPIELEITESLLLENVESAIEKMAKLKESQISISIDDFGTGYSSLRYLKHLA 587
            L++  +TG  + +EITE LLL+      EK+   +++ + +S+DDFGTGYSSL YLK   
Sbjct: 867  LQKLDVTGTGVCVEITEGLLLDASMGVTEKLLAYRDAGVQVSLDDFGTGYSSLAYLKKFD 926

Query: 588  VDVLKIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIAEGVEDTSELAALKKLGCNQF 647
            +D LKID+SF   +  D++DQ + + I+ +A KL ++VIAEGVE  ++   L   GC+  
Sbjct: 927  IDYLKIDQSFTRNIDTDESDQTLCEAIIVMAHKLGMKVIAEGVETEAQRQVLLTAGCDYG 986

Query: 648  QGYLFDKPLRAEEIAQRFV 666
            QGYLF KP+ A E A +++
Sbjct: 987  QGYLFSKPVSATEFASKYL 1005