Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 878 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  327 bits (837), Expect = 2e-93
 Identities = 182/454 (40%), Positives = 269/454 (59%), Gaps = 12/454 (2%)

Query: 215 DELSEL---ASTFQSMWKGKELAESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSH 271
           DEL ++    + F  +   K+ +E++L  LAY+D LT L NR  L+ +L   +  A+  +
Sbjct: 423 DELGDVRYFVAVFSDISAQKQ-SEAQLAHLAYFDPLTHLPNRMKLMMQLKQELRHAKRLN 481

Query: 272 STGVLFYLDLDRFKTINDSLGHTIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIPY 331
           +     ++D+D FK INDS GH+IGD+++  +A R+ +  +   + +RIGGDEF  LI  
Sbjct: 482 AQLATVFIDVDLFKHINDSFGHSIGDEMLVELAKRLRSQLQEQDVLSRIGGDEFVALISG 541

Query: 332 L-SPAKAEEVAKQLLTLISNPYAVD--DHQFYCTVSIGISVFPSVGSCNIDVLRQADTAL 388
           + S   A     QL  +   P+ V   DH    T S+G+S++P  GS    +LR AD A+
Sbjct: 542 IQSHEDAAAAINQLRQVFEQPFVVSTGDH-LRLTASMGVSIYPDDGSNADTLLRNADAAM 600

Query: 389 YRAKASGRNKFMFYEPEMQAQVESFLEIEKGLHEALNQRQLELFYQPQVD-EQHNIIGVE 447
           YRAK+ GRN F FY   +  Q    L+++  L+ AL Q  L L YQP++D      IGVE
Sbjct: 601 YRAKSEGRNNFAFYTESLTKQSFEHLKLQSALYGALEQNALYLMYQPKLDLVSRKTIGVE 660

Query: 448 ALIRWNHPKRGLLPPGVFMPIAEETGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRLA 507
           AL+RWN P  G + PGVF+P+AE+ G I  IG W++E AC Q  +W  +G     F R+A
Sbjct: 661 ALLRWNDPILGQISPGVFIPVAEKIGLIYDIGLWVLETACLQGVRWLTEG---KPFGRIA 717

Query: 508 INISPLQFAQESFIEQVNHALRQAGITGEPIELEITESLLLENVESAIEKMAKLKESQIS 567
           +N++  Q  + SF+E V   L Q G+    +ELE+TES+++ N + AI  +  L +  I 
Sbjct: 718 VNVAGQQLQRSSFVEDVKRILTQTGLPATCLELEVTESVMMHNPDVAIRDLKLLGDLGIE 777

Query: 568 ISIDDFGTGYSSLRYLKHLAVDVLKIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIA 627
           +S+DDFGTGYSSL YLK L +  LKID+SFV  +  D N+ AI   ++A+   L LE++A
Sbjct: 778 LSVDDFGTGYSSLNYLKKLPIHKLKIDQSFVRDIPFDTNNTAIAKAVIALGHALKLEIVA 837

Query: 628 EGVEDTSELAALKKLGCNQFQGYLFDKPLRAEEI 661
           EGVE  ++   L +  C+Q QGYLF +PL   ++
Sbjct: 838 EGVETQAQAEFLTQNLCDQAQGYLFSRPLLPADV 871