Pairwise Alignments

Query, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1487 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  330 bits (846), Expect = 3e-94
 Identities = 176/433 (40%), Positives = 259/433 (59%), Gaps = 6/433 (1%)

Query: 231  KELAESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHSTGVLFYLDLDRFKTINDS 290
            ++  E+ L +LA YD LTGL NRSL   +L  +I+TAQ +     L +LDLDRFK +NDS
Sbjct: 1045 RKRTEADLRRLANYDVLTGLPNRSLFSSRLLQSIQTAQQTGEKLALLFLDLDRFKHVNDS 1104

Query: 291  LGHTIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIPYLSPA-KAEEVAKQLLTLIS 349
             GH++GD L+   + R+++   +++L  R GGDEF +L+   +   +   +A++LL  I 
Sbjct: 1105 YGHSMGDALLVEASNRLQSCIGSEHLLCRFGGDEFVILLRNANNLNEINHIAERLLAQIV 1164

Query: 350  NPYAVDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTALYRAKASGRNKFMFYEPEMQAQ 409
             P+ +   +FY + SIGIS++P         ++ AD A+Y AK  GR  F +Y  E  AQ
Sbjct: 1165 APFKLFGREFYISTSIGISIWPDDAVQPEAFIKNADLAMYHAKEEGRGNFKYYSSERNAQ 1224

Query: 410  VESFLEIEKGLHEALNQRQLELFYQPQVD--EQHNIIGVEALIRWNHPKRGLLPPGVFMP 467
                L +E  L +A+ + + EL+YQPQ+D       IG+EALIRW HPK G + P +F+ 
Sbjct: 1225 ALYHLRLEADLRKAIEREEFELYYQPQIDILRGDKFIGMEALIRWRHPKEGYIRPDIFIK 1284

Query: 468  IAEETGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRLAINISPLQFAQESFIEQVNHA 527
            +AE  G ++ I  W+  +AC   A+W K+   P    +L++NIS + F Q  FIE +   
Sbjct: 1285 VAEACGLVVEIDRWVFRRACLDGAKWVKRCAAP---FKLSVNISAVHFRQPDFIEGLKKI 1341

Query: 528  LRQAGITGEPIELEITESLLLENVESAIEKMAKLKESQISISIDDFGTGYSSLRYLKHLA 587
            L    +    + LEITE +L++ V++A   + +LKE  I ++IDDFGTGYSSL YL+H  
Sbjct: 1342 LADTQMPTSSLGLEITEGVLMKEVQAAKSHLTQLKELGIEVAIDDFGTGYSSLAYLRHFD 1401

Query: 588  VDVLKIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIAEGVEDTSELAALKKLGCNQF 647
            V+ LKIDRSF+  +  +  DQAIV +I+ +AR L L V+AEGVE   +L  +   GC   
Sbjct: 1402 VNTLKIDRSFLIDIATNSADQAIVSSIIELARNLKLTVVAEGVETVEQLEQVFSRGCYIV 1461

Query: 648  QGYLFDKPLRAEE 660
            QGY F KP+   E
Sbjct: 1462 QGYYFAKPMSVTE 1474