Pairwise Alignments

Query, 684 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 635 a.a., GGDEF domain protein from Pseudomonas fluorescens FW300-N2E2

 Score =  302 bits (774), Expect = 3e-86
 Identities = 163/413 (39%), Positives = 241/413 (58%), Gaps = 4/413 (0%)

Query: 256 AHIDSLTGLYNRHGFTKRLEQCIQN----ETPLVMLYLDIDNFKNINDSLGHHIGDKVIK 311
           AH D LTGL NR  F+ R EQ + +    +    +L LD+D+FKNINDSLGH++GD+++K
Sbjct: 208 AHHDPLTGLPNRLLFSDRTEQALASAQLHKRGCALLLLDLDHFKNINDSLGHNVGDELLK 267

Query: 312 EVAARLKRLLPQQAVLGHLGGDEFGLILPEPEHNRSAEMLADRIISLINQPFDLHHFSKR 371
            VA R + L      L  LGGDEF +++        A  LA RI+  + +P      +  
Sbjct: 268 GVAERFRGLFAPGVTLARLGGDEFAVLVENCSQPGQAAALARRILDALKEPLRFDDHALF 327

Query: 372 LACSIGSVRYPGDGNDARVLLQNADTAMYEAKERGRNRLIKFNDQMNKEARMRLWLEIEL 431
           +  SIG   +PGD   A  LL+NAD+A+++AK  GR+    + +++   A+ R+ +  EL
Sbjct: 328 INASIGISLFPGDALSAGQLLRNADSALFKAKSAGRDGYALYTEELTAHAQQRVEIAFEL 387

Query: 432 QKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVEGYISPGAFIPVAEKAGLIEHLG 491
           ++ALQQ  L V YQP  +     + G EALVRW+HP  G +SP  FIP+AE+ GLI  + 
Sbjct: 388 RRALQQQELRVHYQPVHDLATSRLIGVEALVRWEHPTRGLVSPAEFIPIAERTGLIAQVD 447

Query: 492 RVVMREVFATVKRWKLQGILPGRVAINISPEQFGNPQLIDYLEKLLRTTGLDPNNITFEL 551
             VM +    + +W+  G+    VA+N+S   F   +L D + ++L  TGLDP  +  E+
Sbjct: 448 AWVMDQACRQMCQWQQAGVALSFVAVNVSSRLFARRELYDQVAQVLHDTGLDPGCLELEV 507

Query: 552 TESAVMSDSEHTQQMLNAIKKLGFTLSIDDFGTGYSSLAYLARFPIDELKIDRAFISNID 611
           TESAVM D E   + ++ +++LG  L+IDDFGTGYSSL  L R P+ +LKID+ F++ + 
Sbjct: 508 TESAVMDDPEVALEQMHRLRELGVRLAIDDFGTGYSSLLRLKRLPVQKLKIDQGFVAGLP 567

Query: 612 TLPKQLTVIENIINLGRSLNLTVVAEGVETQQQATLLSNLNCHSIQGFHFYRP 664
                  ++  II L  S+ + V AEG+E ++QA  L    C   QG+ F RP
Sbjct: 568 WDEDDAAIVRVIIALAHSMGMQVHAEGIEQREQAAFLLGQACELGQGYWFGRP 620