Pairwise Alignments

Query, 684 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 790 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  308 bits (789), Expect = 6e-88
 Identities = 168/437 (38%), Positives = 261/437 (59%), Gaps = 4/437 (0%)

Query: 241 ADEAPKQFSATTQVDAHIDSLTGLYNRHGFTKRLEQCIQNET----PLVMLYLDIDNFKN 296
           A EA   ++   +  A+ D LT L NR  F+K L Q I   +     L +L+LD+D FK 
Sbjct: 342 AGEAKIAYAENVEYLAYHDGLTALPNRSLFSKLLSQSIGEASRYHRQLAVLFLDLDRFKQ 401

Query: 297 INDSLGHHIGDKVIKEVAARLKRLLPQQAVLGHLGGDEFGLILPEPEHNRSAEMLADRII 356
           +ND+LGH  GD+++KEVA RLK  L     +  LGGDEF ++LPE   ++     A +++
Sbjct: 402 VNDTLGHDAGDQLLKEVALRLKACLRTSDTVARLGGDEFVILLPELSDDKDVATAAQKVL 461

Query: 357 SLINQPFDLHHFSKRLACSIGSVRYPGDGNDARVLLQNADTAMYEAKERGRNRLIKFNDQ 416
             I +PF+L     R+  S+G   +P DG D + L +NAD AMY+AK+ G+N    ++ +
Sbjct: 462 GAIARPFNLQGQEFRVTASVGISVFPQDGLDEQTLKKNADIAMYQAKQCGKNNFQFYSAK 521

Query: 417 MNKEARMRLWLEIELQKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVEGYISPGA 476
           +N ++  R+ LE+ L+ AL+++  ++ YQ K +     I G EAL+RW HP  G ++P  
Sbjct: 522 LNADSLERMTLELSLRHALERHEFQLHYQAKRDIGSGRITGMEALLRWNHPDLGIVAPMQ 581

Query: 477 FIPVAEKAGLIEHLGRVVMREVFATVKRWKLQGILPGRVAINISPEQFGNPQLIDYLEKL 536
           FIPVAE+ GLI  +G+ V++        W+ QG+    VA+N++  QF +  L+  L  +
Sbjct: 582 FIPVAEETGLIVPIGKWVLKTACQQNVAWQQQGLPCLGVAVNLTARQFADENLLTDLAGI 641

Query: 537 LRTTGLDPNNITFELTESAVMSDSEHTQQMLNAIKKLGFTLSIDDFGTGYSSLAYLARFP 596
           L  TG+D   +  E+ ES +M D +    +L  +K L   ++IDDFG GYSSL+ L +FP
Sbjct: 642 LAETGMDARLLELEIAESLLMQDVKKALNVLTGLKHLKVRIAIDDFGIGYSSLSALEQFP 701

Query: 597 IDELKIDRAFISNIDTLPKQLTVIENIINLGRSLNLTVVAEGVETQQQATLLSNLNCHSI 656
           +D +KIDR+ I +  ++ +   + E II +GR+L+LTVVA+GVET++QA  L +  C   
Sbjct: 702 LDVIKIDRSCICDTSSVSEDKALTEAIIAMGRTLSLTVVAQGVETKEQADFLRDNACDEF 761

Query: 657 QGFHFYRPQPKHEVEEL 673
           QGF+F +P P  + + L
Sbjct: 762 QGFYFNKPVPADQFKVL 778