Pairwise Alignments

Query, 684 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1247 a.a., diguanylate cyclase from Pseudomonas fluorescens FW300-N2C3

 Score =  308 bits (790), Expect = 8e-88
 Identities = 165/418 (39%), Positives = 246/418 (58%), Gaps = 4/418 (0%)

Query: 246  KQFSATTQVDAHIDSLTGLYNRHGFTKRLEQCI----QNETPLVMLYLDIDNFKNINDSL 301
            K   A     AH D LTGL NR  F  RL   +    +N     +L+LD+D FK+INDSL
Sbjct: 797  KHAQARLDYQAHHDPLTGLPNRTLFESRLLAALNGQQENGGQGAVLFLDLDRFKHINDSL 856

Query: 302  GHHIGDKVIKEVAARLKRLLPQQAVLGHLGGDEFGLILPEPEHNRSAEMLADRIISLINQ 361
            GH +GD ++K +A RL+  L     +  LGGDEF ++LP  +    AE +A ++++    
Sbjct: 857  GHPVGDLLLKGIAVRLREQLRDIDTVARLGGDEFIILLPGLQQPSDAEHIAQKLLNCFTA 916

Query: 362  PFDLHHFSKRLACSIGSVRYPGDGNDARVLLQNADTAMYEAKERGRNRLIKFNDQMNKEA 421
            PF        ++ SIG+  YP DG D   L++NAD AMY +K +GRNR+  +   +  +A
Sbjct: 917  PFQAGEHEFFISASIGTSLYPQDGCDVATLVKNADAAMYRSKAKGRNRVESYTRDLTAQA 976

Query: 422  RMRLWLEIELQKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVEGYISPGAFIPVA 481
              R+ LE EL++A+++N L + +QPK++  D  + GAEAL+RW HP  G + P  FIP+A
Sbjct: 977  SERVALEHELRRAIERNELSLSFQPKISLADNRLVGAEALIRWYHPTFGDVPPEHFIPLA 1036

Query: 482  EKAGLIEHLGRVVMREVFATVKRWKLQGILPGRVAINISPEQFGNPQLIDYLEKLLRTTG 541
            E+ G+I  +G  V+      +  W       G +++N++  Q   P L+  +E+LLR   
Sbjct: 1037 EENGMILQIGDWVLERACRQLCEWNSTYESLGSLSVNLAGAQLRQPNLLGRIEQLLREHQ 1096

Query: 542  LDPNNITFELTESAVMSDSEHTQQMLNAIKKLGFTLSIDDFGTGYSSLAYLARFPIDELK 601
            L P+ +  E+TE+ +MS +E    +L+ +K LG  L+IDDFGTGYSSL+YL R P+D LK
Sbjct: 1097 LRPDLLQLEITENFIMSQAEEALTVLHQLKNLGVQLAIDDFGTGYSSLSYLKRLPLDILK 1156

Query: 602  IDRAFISNIDTLPKQLTVIENIINLGRSLNLTVVAEGVETQQQATLLSNLNCHSIQGF 659
            ID++F+  +   P    ++  II LGRS+  T++AEGVET  Q   L+   C  IQG+
Sbjct: 1157 IDQSFVRGLPDDPHDAAIVRAIIALGRSMQFTIIAEGVETLAQQQFLAEEGCEQIQGY 1214



 Score = 33.9 bits (76), Expect = 5e-05
 Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 16/145 (11%)

Query: 36  VNERYCDIAGLSSEEMVGMSDSQV-------LGEHFYRHLKPFYERAFNNEHIESELTLS 88
           VN+ + +  GLS+ E+VG + +++       +G    + L+     A +  ++E     S
Sbjct: 463 VNKAFEEQIGLSAAEVVGHNATELNIWGIQGVGPSLLQRLQ-----AGSIRNLEMPFRRS 517

Query: 89  EIDLETSLHFSLSPIMINDRVQYLVFHAIDTSEKQILVRSLEESESKYALLTTLLPDGLM 148
              + T L  S  P  + D    LV    D S+ +   + L+ SE K+A      PDGL+
Sbjct: 518 NGQVFTGL-ISAEPFDL-DTTPALVVVVRDISQLKETQQQLQTSEEKFAKAFHASPDGLL 575

Query: 149 M--VENDCIISANPSAARLLGFDDA 171
           +    +  +I  N   +R+ GF+ A
Sbjct: 576 LSRQSDGLLIEVNEGFSRITGFNSA 600



 Score = 28.9 bits (63), Expect = 0.002
 Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 3/70 (4%)

Query: 117 IDTSEKQILVRSLEESESKYALLTTLLPDGLMMVE--NDCIISANPSAARLLGFDDAQKL 174
           ID SE +    +L  SE K+A +    PD L++    + C++  N +    +G   A ++
Sbjct: 420 IDISEAKRTEEALRLSEQKFASVFRQCPDILVIARLLDGCLLEVNKAFEEQIGL-SAAEV 478

Query: 175 LGENLSRLFI 184
           +G N + L I
Sbjct: 479 VGHNATELNI 488