Pairwise Alignments

Query, 684 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 828 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Pseudomonas syringae pv. syringae B728a

 Score =  313 bits (803), Expect = 2e-89
 Identities = 218/687 (31%), Positives = 348/687 (50%), Gaps = 45/687 (6%)

Query: 13  FAKITSHSPFFFAILNDQHQYVM-VNERYCDIAGLSSEEM-----------VGMSDSQVL 60
           FAK    SP   AI   Q   ++ VNE +C   G S +             V +S+   L
Sbjct: 144 FAKAFHASPDGMAITRQQDGMLLEVNEGFCRQTGYSEKYCLDHSTFDLGIWVDLSERSKL 203

Query: 61  GEHFYRH--LKPFYERAFNNEHIESELTLSEIDLETSLHFSLSPIMINDRVQYLVFHAID 118
            E   +H  +K    R  NN     ++ L E+        S  P++I      L      
Sbjct: 204 IERMKKHGFVKDMRVRIRNNN---GDIRLCEL--------SSQPLIIAGEDCLLTITRDI 252

Query: 119 TSEKQILVRSLEESESKYALLTTLLPDGLMMVENDCIISA-NPSAARLLGFDDAQKLLGE 177
           T  +Q     ++E     A +     +G+++   D  ISA N +   + G+ +++ + G+
Sbjct: 253 TESRQ-----MQEKLHLAATVFESTAEGVLITNTDQSISAVNRAFTEITGYSESEAI-GK 306

Query: 178 NLSRLFIDEKTKTVFSSQLASLLTEKPLVCLTGPRCGFERKIQLHAGCTSLLGNQSQLIL 237
               L   +     +++    L  E       G      +  +L+    ++   +++  L
Sbjct: 307 TPRLLASGQHDSAFYAAMWHQLAAEGHW---QGEISNRRKNGELYPSWLTISAVRNKDNL 363

Query: 238 LQD-----AD-EAPKQFSATTQVDAHIDSLTGLYNRHGFTKRLEQCIQNETPL----VML 287
           L       AD  + KQ  A     AH D LTGL NR  F  RL+  + +         +L
Sbjct: 364 LTHFVAVFADISSLKQAQARLDYQAHHDPLTGLPNRILFESRLQAALLHSEESGSLGAVL 423

Query: 288 YLDIDNFKNINDSLGHHIGDKVIKEVAARLKRLLPQQAVLGHLGGDEFGLILPEPEHNRS 347
           +LD+D FK+INDSLGH +GD ++K +A RLK  L     +  LGGDEF ++LP       
Sbjct: 424 FLDLDRFKHINDSLGHPVGDLLLKGIAHRLKETLRDIDTVARLGGDEFIVLLPGLLQTSD 483

Query: 348 AEMLADRIISLINQPFDLHHFSKRLACSIGSVRYPGDGNDARVLLQNADTAMYEAKERGR 407
           A+ +A+++++  + PF+       ++ SIGS  +P DG D   L++NAD AMY +K +GR
Sbjct: 484 AQAIANKLLACFSTPFEAGEHELYISPSIGSCVFPTDGTDVATLVKNADAAMYRSKAKGR 543

Query: 408 NRLIKFNDQMNKEARMRLWLEIELQKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHP 467
           NR+  +   ++ +A  R+ LE EL++AL++N L + YQPK++    ++ GAEAL+RW HP
Sbjct: 544 NRVESYTCDLSDQASERIALEQELRRALERNQLTLAYQPKIDLLTHTMAGAEALIRWNHP 603

Query: 468 VEGYISPGAFIPVAEKAGLIEHLGRVVMREVFATVKRWKLQGILPGRVAINISPEQFGNP 527
             G + P  FIP+AE+ G+I  +G  V+ +    +  W+      G +++N++  Q    
Sbjct: 604 TFGEVPPEHFIPLAEENGMILQIGDWVLEQACRQMGIWRKTCQPFGPLSVNLAGAQLRQT 663

Query: 528 QLIDYLEKLLRTTGLDPNNITFELTESAVMSDSEHTQQMLNAIKKLGFTLSIDDFGTGYS 587
            L++ +E+LL   GL+P  +  E+TE+ +MS ++    +L+ +K LG  L+IDDFGTGYS
Sbjct: 664 NLLERIEQLLTDNGLEPGCLQLEITENFIMSQTQEALAVLHQLKTLGVQLAIDDFGTGYS 723

Query: 588 SLAYLARFPIDELKIDRAFISNIDTLPKQLTVIENIINLGRSLNLTVVAEGVETQQQATL 647
           SL+YL R P+D LKID++F+  +        ++  II LGRSL LTV+AEGVE  +Q   
Sbjct: 724 SLSYLKRLPLDILKIDQSFVRGLPEDTHDAAIVRAIIALGRSLQLTVIAEGVENSEQQQF 783

Query: 648 LSNLNCHSIQGFHFYRPQPKHEVEELF 674
           L++  C  IQG+    P    E    F
Sbjct: 784 LTSEGCEQIQGYIISLPLDAEEFRARF 810