Pairwise Alignments

Query, 684 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 972 a.a., PAS:GGDEF from Pseudomonas syringae pv. syringae B728a

 Score =  313 bits (801), Expect = 3e-89
 Identities = 170/428 (39%), Positives = 256/428 (59%), Gaps = 5/428 (1%)

Query: 256 AHIDSLTGLYNRHGFTKRLEQCIQNETP----LVMLYLDIDNFKNINDSLGHHIGDKVIK 311
           A  DSLT L NR   +  L + I  +T     + ++++D+D FK +ND++GH +GD+++ 
Sbjct: 533 AENDSLTHLPNRWFLSNYLREIISRKTSAPDAVSVIFIDLDRFKAVNDTMGHSVGDQLLI 592

Query: 312 EVAARLKRLLPQQAVLGHLGGDEFGLILPEPEHNRSA-EMLADRIISLINQPFDLHHFSK 370
           +   RLK  + + +V+  LGGDEF +++    ++ S  + LA  ++  + +PF+L     
Sbjct: 593 QAGRRLKDCIGENSVVARLGGDEFSIVVTHSVYSESLIKSLATHVVEALGKPFNLGGQDI 652

Query: 371 RLACSIGSVRYPGDGNDARVLLQNADTAMYEAKERGRNRLIKFNDQMNKEARMRLWLEIE 430
            ++ S+G   YP DG D  V+L+NADTAMY+AK+ GRN    +N +MN+    RL  E  
Sbjct: 653 FVSASVGIANYPFDGRDTGVILKNADTAMYQAKKSGRNNFKFYNARMNESLTRRLQTETL 712

Query: 431 LQKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVEGYISPGAFIPVAEKAGLIEHL 490
           L+ AL+++   + +QPKV+  D  I+G EAL+RW HP +G +SP  FIP+ E  GLI  +
Sbjct: 713 LRGALERDEFILHFQPKVSLTDGRISGLEALLRWNHPEQGMVSPADFIPILEDTGLIIPV 772

Query: 491 GRVVMREVFATVKRWKLQGILPGRVAINISPEQFGNPQLIDYLEKLLRTTGLDPNNITFE 550
           G  V+R+V  T+KRW+   I    +AIN+S  Q     L + ++ ++   G++P  + FE
Sbjct: 773 GVWVIRKVCETLKRWEENHIRLVPIAINLSVRQLQVKGLAETVKHIVEAYGINPALLEFE 832

Query: 551 LTESAVMSDSEHTQQMLNAIKKLGFTLSIDDFGTGYSSLAYLARFPIDELKIDRAFISNI 610
           LTES +M D E   ++L  IK  G +LS+DDFGTGYSSLAYL RFP+D LKIDRAFI +I
Sbjct: 833 LTESMLMIDPESAVEILRDIKSYGISLSVDDFGTGYSSLAYLKRFPLDALKIDRAFIKDI 892

Query: 611 DTLPKQLTVIENIINLGRSLNLTVVAEGVETQQQATLLSNLNCHSIQGFHFYRPQPKHEV 670
            +  +   +   +I L   L L V+AEGVET  Q  LL    C  +QG+ F +P    E 
Sbjct: 893 TSNHEDAAITRAVIVLAHELGLNVIAEGVETVDQLELLVTYGCDQMQGYLFSKPVISDEC 952

Query: 671 EELFAQNR 678
             +   +R
Sbjct: 953 AAMIKSSR 960