Pairwise Alignments

Query, 684 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 917 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Synechococcus elongatus PCC 7942

 Score =  308 bits (788), Expect = 1e-87
 Identities = 169/430 (39%), Positives = 247/430 (57%), Gaps = 6/430 (1%)

Query: 256 AHIDSLTGLYNRHGFTKRLEQCI-----QNETPLVMLYLDIDNFKNINDSLGHHIGDKVI 310
           A+ DSLT L NR     RL Q        N+T +VML LD+D FKNIND+LGH  GD ++
Sbjct: 485 ANYDSLTDLPNRSLALDRLRQATALSERSNDTVIVML-LDLDRFKNINDTLGHSYGDCLL 543

Query: 311 KEVAARLKRLLPQQAVLGHLGGDEFGLILPEPEHNRSAEMLADRIISLINQPFDLHHFSK 370
           +E+A RL+  LP++  +  LGGDEF +I P  + N   E L+ +++ +I+QP  +     
Sbjct: 544 QEIAKRLRYHLPREITISRLGGDEFLIICPAVKENIHLEKLSQQLLKIISQPITIEAEEL 603

Query: 371 RLACSIGSVRYPGDGNDARVLLQNADTAMYEAKERGRNRLIKFNDQMNKEARMRLWLEIE 430
            +  SIG   YP DG    VL++NADTAMY AK  G N    F   MN EA  R+ LE  
Sbjct: 604 VITASIGVACYPNDGVTPEVLMRNADTAMYSAKRNGGNDFQLFMPTMNAEAHARIQLETH 663

Query: 431 LQKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVEGYISPGAFIPVAEKAGLIEHL 490
           L+ AL+Q  L+V+YQP ++ +D  + G EAL RW  P  G I P  FIP+AE+ GLI  L
Sbjct: 664 LRHALEQYQLKVFYQPIISLQDNHVVGLEALARWHDPELGNIPPDRFIPIAEETGLIIPL 723

Query: 491 GRVVMREVFATVKRWKLQGILPGRVAINISPEQFGNPQLIDYLEKLLRTTGLDPNNITFE 550
           G  V+ +    V  W+ +   P  VA+N+SP Q  + +      K+L+     PN +  E
Sbjct: 724 GYRVIEQACQDVAIWQQKYNYPFWVAVNLSPRQLRSNRFTQITAKILQRHNFRPNYLKLE 783

Query: 551 LTESAVMSDSEHTQQMLNAIKKLGFTLSIDDFGTGYSSLAYLARFPIDELKIDRAFISNI 610
           +TE  ++ ++    QML+ + + G  L++DDFGTGYS+L+YL R+P   LK+D++F+ +I
Sbjct: 784 VTEQMLLDNTSTIAQMLDTLHRKGIALALDDFGTGYSALSYLRRYPFQSLKVDQSFLRDI 843

Query: 611 DTLPKQLTVIENIINLGRSLNLTVVAEGVETQQQATLLSNLNCHSIQGFHFYRPQPKHEV 670
               +   +++ I+ +   L +  VAEGVET +Q   L  + C   QG+ F RP P  E+
Sbjct: 844 PHSTESCALVKTIVAMAHGLGMQAVAEGVETAEQVEFLKAIGCEYGQGYWFSRPLPAVEI 903

Query: 671 EELFAQNRRH 680
           +   A +  H
Sbjct: 904 DSFLAVSTGH 913



 Score = 28.5 bits (62), Expect = 0.001
 Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 4/134 (2%)

Query: 112 LVFHAIDTSEKQILVRSLEESESKYALLTTLLPDGLMMV-ENDCIISANPSAARLLGFDD 170
           LV +  D +E+  ++  +++SE+++ +L    P+G++++ E   ++ AN  A ++  FD 
Sbjct: 236 LVGNIRDITEEHHILSLVQDSETRFQVLIESNPNGILVLDEQGAVLFANHVAEQV--FDQ 293

Query: 171 A-QKLLGENLSRLFIDEKTKTVFSSQLASLLTEKPLVCLTGPRCGFERKIQLHAGCTSLL 229
           +  +L G+ L        T  +   Q    L    +  +  P    +  + L    TSL 
Sbjct: 294 SLSELQGKYLGLPLTLNVTVQLDLVQPDGSLRYVEVSIVPIPWQQSKAYLALLTDITSLQ 353

Query: 230 GNQSQLILLQDADE 243
             Q +L LLQ+A E
Sbjct: 354 QTQQRLKLLQEATE 367