Pairwise Alignments

Query, 684 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1491 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  306 bits (783), Expect = 6e-87
 Identities = 191/540 (35%), Positives = 298/540 (55%), Gaps = 21/540 (3%)

Query: 145  DGLMMVENDCIIS-ANPSAARLLGFDDAQKLLGENLSRLFIDEKTKTVFSSQLASLLT-- 201
            +G+++++ D  I  AN +A  +LG   A+ L G     L  +  T     S++A+LL   
Sbjct: 944  EGVLILDADEQIKVANRAAQSILGAGMAE-LAGRKFIALLTEHGTNR---SEIATLLANG 999

Query: 202  -----EKPLVCLTGPRCGFERKIQLHAGCTSLLGNQSQLILLQDADEAPKQFSATTQVDA 256
                 E+ L   +G  C     + +  G    +  Q  +++  D  E  K+  A  +  A
Sbjct: 1000 MSWTGERELRIGSGQVCPVWLNVSVMLGLQGKV--QHYVVVFSDITER-KRSEADLRRLA 1056

Query: 257  HIDSLTGLYNRHGFTKRLEQCI----QNETPLVMLYLDIDNFKNINDSLGHHIGDKVIKE 312
            + D LTGL NR  F  RL Q I    QNE  L +++LD+D FK++NDS GH +GD ++ E
Sbjct: 1057 NYDVLTGLPNRSLFAARLNQAIHKATQNEEKLALMFLDLDRFKHVNDSFGHGMGDALLVE 1116

Query: 313  VAARLKRLLPQQAVLGHLGGDEFGLILPEPEHNRSAEMLADRIISLINQPFDLHHFSKRL 372
             AARL+  +  +  L   GGDEF +++   E + +   LA+ I+  I  PF L      +
Sbjct: 1117 AAARLQSCIDPEYTLCRFGGDEFVVLIHGAEVD-TLNHLANTILGQIETPFKLFGREFYI 1175

Query: 373  ACSIGSVRYPGDGNDARVLLQNADTAMYEAKERGRNRLIKFNDQMNKEARMRLWLEIELQ 432
            + SIG   +P D      L++NAD AMY AKE GR     ++ + N EA   L LE +L+
Sbjct: 1176 STSIGISIWPDDARQPEALIKNADLAMYHAKEEGRGNFQYYSQERNAEALYHLRLEADLR 1235

Query: 433  KALQQNGLEVWYQPKVNARDFS-INGAEALVRWKHPVEGYISPGAFIPVAEKAGLIEHLG 491
            KAL++    + YQP+V+  D + + G EAL+RW+HP +GYI    FI VAE  GL+  + 
Sbjct: 1236 KALERQEFCLHYQPQVDVNDDNQVIGMEALLRWQHPKDGYIRTDIFIKVAEACGLVIDID 1295

Query: 492  RVVMREVFATVKRWKLQGILPGRVAINISPEQFGNPQLIDYLEKLLRTTGLDPNNITFEL 551
            + V+R+      RW  +   P ++++NIS   F  P  ID+L + L  T +   N+  E+
Sbjct: 1296 KWVLRQACLDGARWSRKLKRPFKISVNISAVHFRQPDFIDHLRRTLEETCIPVENLALEI 1355

Query: 552  TESAVMSDSEHTQQMLNAIKKLGFTLSIDDFGTGYSSLAYLARFPIDELKIDRAFISNID 611
            TE  +M +    +  L  ++++G  ++IDDFGTGYSSLAYL  F ++ LKIDR+F+ +I 
Sbjct: 1356 TEGVLMKELHIARDHLRLLREMGVQVAIDDFGTGYSSLAYLRHFDVNLLKIDRSFLIDIA 1415

Query: 612  TLPKQLTVIENIINLGRSLNLTVVAEGVETQQQATLLSNLNCHSIQGFHFYRPQPKHEVE 671
                   ++ +II L R+L L VVAEGVET++Q   + +  CH IQG++F +P  + +++
Sbjct: 1416 DNQADQAIVSSIIELARNLKLKVVAEGVETREQLNQVLSRGCHVIQGYYFAKPMARDDMD 1475