Pairwise Alignments

Query, 684 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 855 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  323 bits (827), Expect = 3e-92
 Identities = 175/418 (41%), Positives = 252/418 (60%), Gaps = 5/418 (1%)

Query: 256 AHIDSLTGLYNRHGFTKRLEQCIQNET----PLVMLYLDIDNFKNINDSLGHHIGDKVIK 311
           A+ D LT L NRH    RLEQ +         + +++LD+D FK INDS GH  GD+V+K
Sbjct: 413 ANFDMLTHLPNRHLIMDRLEQAMHQAQRTGRQVCVMFLDLDRFKQINDSYGHSAGDEVLK 472

Query: 312 EVAARLKRLLPQQAVLGHLGGDEFGLILPEPEHNRSAEMLADRIISLINQPFDLHHFSKR 371
             A RL+  +     +G LGGDEF +IL   E   +   +A++I+  +++PF +      
Sbjct: 473 LTARRLRNCVRISDSVGRLGGDEFIVILSNVEDQHAGAYIAEKILYSLSEPFPIGGTEVF 532

Query: 372 LACSIGSVRYPGDGNDARVLLQNADTAMYEAKERGRNRLIKFNDQMNKEARMRLWLEIEL 431
              S+G   +P  G  A  LL+NAD AMY AK+ G  R   F   M + +   L +E +L
Sbjct: 533 CIPSVGITYFPDHGETAPDLLRNADVAMYHAKQGGERRYAIFTPDMARRSLALLTMESDL 592

Query: 432 QKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVEGYISPGAFIPVAEKAGLIEHLG 491
           + AL ++  E+ +QPKV A D ++ GAEAL+RW+HP +G I+PG FIP+AE++GLI  +G
Sbjct: 593 RHALARDEFELHFQPKVRA-DLTLIGAEALIRWRHPEKGLINPGDFIPLAEESGLILPIG 651

Query: 492 RVVMREVFATVKRWKLQGILPGRVAINISPEQFGNPQLIDYLEKLLRTTGLDPNNITFEL 551
           R  +RE    V  W+ +G+    V++N+SP QF +  L++ + ++L  TGL+P  +  E+
Sbjct: 652 RWTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQDQTLVETVRQILVETGLEPEALDLEI 711

Query: 552 TESAVMSDSEHTQQMLNAIKKLGFTLSIDDFGTGYSSLAYLARFPIDELKIDRAFISNID 611
           TE+ +  D EH    L A+K LG TLSIDDFGTGYSSL YL  FPID LKID+ F+ ++ 
Sbjct: 712 TETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSSLNYLKTFPIDTLKIDQTFVRDVL 771

Query: 612 TLPKQLTVIENIINLGRSLNLTVVAEGVETQQQATLLSNLNCHSIQGFHFYRPQPKHE 669
              K   ++  II L R+L  +VVAEGVE  +QA  L + +C + QGF + RP P  E
Sbjct: 772 HSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQGFLYSRPLPPAE 829