Pairwise Alignments

Query, 684 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 816 a.a., response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  310 bits (795), Expect = 1e-88
 Identities = 192/560 (34%), Positives = 305/560 (54%), Gaps = 19/560 (3%)

Query: 129 LEESESKYALLTTLLPDGLMMVENDCIIS-ANPSAARLLGF--DDAQKLLGENLSRLFID 185
           L+    +  ++   + D ++  +++ +I+  NP A RL G+   DA  L  E +  L  D
Sbjct: 258 LDTENRRLKIMLNAIGDAVIATDSEAMITFMNPIAERLTGWVCRDAIGLHIEQVMDL-CD 316

Query: 186 EKTKTVFSSQLASLLTEKPLVCLTGPRCGFER----KIQLHAGCTSLLGNQSQ----LIL 237
            KTK    + +   + EK  V +    C          Q+      +  ++ +    +I+
Sbjct: 317 AKTKYRSPNPVTIAIKEKRNVAMA-LNCQLNSLDGTTFQIEDSAAPITDSEGKVTGGIIV 375

Query: 238 LQDADEAPKQFSATTQVDAHIDSLTGLYNRHGFTKRLEQCI----QNETPLVMLYLDIDN 293
             D  E+       + +  H D LT L NR     R+          +  + ++ +DID+
Sbjct: 376 FHDCSESVAMSLKMSHLANH-DQLTDLPNRILLHDRINHACAVADSYDKSVALMLIDIDH 434

Query: 294 FKNINDSLGHHIGDKVIKEVAARLKRLLPQQAVLGHLGGDEFGLILPEPEHNRSAEMLAD 353
           FK +NDSLGH  GD+VIK+VA RL+ L+   A LG +GGDEF L+LP        + +A 
Sbjct: 435 FKYLNDSLGHSYGDQVIKQVAKRLQSLIDPNATLGRIGGDEFVLLLPSLTATSQVDSIAT 494

Query: 354 RIISLINQPFDLHHFSKRLACSIGSVRYPGDGNDARVLLQNADTAMYEAKERGRNRLIKF 413
            I+  +N PF +      L+ S+G   YP D   A  L+ + D AMY AK+ GRNR   F
Sbjct: 495 DIVRSLNTPFRIDGQEYTLSVSVGISIYPSDALRAEELMTHVDAAMYRAKDLGRNRFCYF 554

Query: 414 NDQMNKEARMRLWLEIELQKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVEGYIS 473
           ++ + +E   R  L   L+ A+    +EV+YQPKV+ +   I GAEAL R   P    IS
Sbjct: 555 SEDLEQELTKRHELVTLLRTAIDTEAIEVYYQPKVDLKTKEIIGAEALARLYDPSGKLIS 614

Query: 474 PGAFIPVAEKAGLIEHLGRVVMREVFATVKRWKLQGILPGRVAINISPEQFGNPQLIDYL 533
           P  FIP+AE+ GLI  LG +++++     K W+ +G  P ++A+NI+ +QF NP+  D +
Sbjct: 615 PLDFIPLAEETGLIHQLGEIILKQSCMAAKAWQKRG-RPLQIAVNIAAKQFTNPEFCDSV 673

Query: 534 EKLLRTTGLDPNNITFELTESAVMSDSEHTQQMLNAIKKLGFTLSIDDFGTGYSSLAYLA 593
            K+L  TGLD + +  E+TES++M D +    +LN +  LG +++IDDFGTGYSSL+YL 
Sbjct: 674 AKVLELTGLDSSFLELEVTESSLMYDFDEALNVLNTLSSLGLSIAIDDFGTGYSSLSYLK 733

Query: 594 RFPIDELKIDRAFISNIDTLPKQLTVIENIINLGRSLNLTVVAEGVETQQQATLLSNLNC 653
            FP++ LKID++F+ ++    + L +++ +I+L +SL L ++AEG+E  +Q   L  L C
Sbjct: 734 FFPVNTLKIDQSFVKDMLGDEQSLDIVKAVIHLAKSLKLKLIAEGIEDAEQLQKLVALEC 793

Query: 654 HSIQGFHFYRPQPKHEVEEL 673
              QG+ F +P P  E ++L
Sbjct: 794 EQGQGYMFSKPLPLKEFDQL 813