Pairwise Alignments

Query, 684 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 833 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  304 bits (778), Expect = 1e-86
 Identities = 172/426 (40%), Positives = 245/426 (57%), Gaps = 6/426 (1%)

Query: 256 AHIDSLTGLYNRHGFTKRLEQCI----QNETPLVMLYLDIDNFKNINDSLGHHIGDKVIK 311
           A+ D+LTGL NR      LEQ +    +N+T   +L++D+D FK INDS GH   D ++K
Sbjct: 408 AYYDALTGLPNRSLLFSLLEQALIEAQRNQTHGAVLFVDLDRFKTINDSFGHAPADALLK 467

Query: 312 EVAARLKRLLPQQAVLGHLGGDEFGLILPEPEHNRSAEMLADRIISLINQPFDLHHFSKR 371
           EVA RL+  L  + V+  LGGDEF + L +      A ++  +I+  + +PF + H    
Sbjct: 468 EVARRLQETLRAEDVVARLGGDEFIVALFDITKREHAALVGQKILDALAEPFQIVHHEVL 527

Query: 372 LACSIGSVRYPGDGNDARVLLQNADTAMYEAKERGRNRLIKFNDQMNKEARMRLWLEIEL 431
           L  SIG   +P DG DA  LL+NADTAMY  K+     L  ++ +MN  +  RL LE  L
Sbjct: 528 LTASIGIAVFPDDGRDAETLLRNADTAMYRVKQTSGGPLF-YSQEMNLRSLERLKLEGAL 586

Query: 432 QKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVEGYISPGAFIPVAEKAGLIEHLG 491
           +KA+++    ++YQP+V      I GAEAL+RW HP +G I P AFIP+AE+ GLI  +G
Sbjct: 587 RKAVERQEFRLYYQPQVELATGRIVGAEALIRWHHPEQGMIPPTAFIPLAEETGLIVSIG 646

Query: 492 RVVMREVFATVKRWKLQGILPGRVAINISPEQFGNPQLIDYLEKLLRTTGLDPNNITFEL 551
             V+       + W+  G     +A+N+SP QF  P L   + + L        N+  E+
Sbjct: 647 AWVLDAACRQGRLWREAGYEDLTIAVNLSPRQF-RPGLSQLVNETLERHAFPGENLELEI 705

Query: 552 TESAVMSDSEHTQQMLNAIKKLGFTLSIDDFGTGYSSLAYLARFPIDELKIDRAFISNID 611
           TE  +M +SE   QML    + G  L++DDFGTGYSSLAYL +FPID LKIDR+F+S I 
Sbjct: 706 TEGMLMHNSEAVIQMLEDFHQAGVRLALDDFGTGYSSLAYLKKFPIDNLKIDRSFVSGIP 765

Query: 612 TLPKQLTVIENIINLGRSLNLTVVAEGVETQQQATLLSNLNCHSIQGFHFYRPQPKHEVE 671
                  + + II++ ++L L V+AEGVET++Q   L    C  IQG+ F  P P  + +
Sbjct: 766 HDGDDSAIAKAIISMAKNLRLLVIAEGVETEEQLDFLRAAGCDEIQGYLFSPPVPVEDFQ 825

Query: 672 ELFAQN 677
            L  +N
Sbjct: 826 LLLERN 831



 Score = 27.7 bits (60), Expect = 0.002
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 14  AKITSHSPFFFAILNDQHQYVMVNERYCDIAGLSSEEM 51
           AKI  H+     + +   + + VN+ +CDI G S  E+
Sbjct: 286 AKIFEHNSEAVIVTDAMQRVLSVNKAFCDITGFSEAEV 323