Pairwise Alignments

Query, 684 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1281 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  311 bits (798), Expect = 1e-88
 Identities = 178/446 (39%), Positives = 249/446 (55%), Gaps = 5/446 (1%)

Query: 235  LILLQDADEAPKQFSATTQVDAHIDSLTGLYNRHGFTKRLEQCIQNET----PLVMLYLD 290
            + L  D  E  K+  A     AH D LTGL NR     RLEQ + +       + ++++D
Sbjct: 831  ITLFSDITER-KETEARIHHLAHHDPLTGLPNRFTLEARLEQSLADARRHGHKVAVMFMD 889

Query: 291  IDNFKNINDSLGHHIGDKVIKEVAARLKRLLPQQAVLGHLGGDEFGLILPEPEHNRSAEM 350
            +D FK INDSLGH +GD ++ E+A RL+  + +   +  LGGDEF ++LP+ E    A  
Sbjct: 890  LDRFKTINDSLGHAVGDSLLMEIAHRLRSAVRESDTVARLGGDEFVVVLPDVEGANDAAH 949

Query: 351  LADRIISLINQPFDLHHFSKRLACSIGSVRYPGDGNDARVLLQNADTAMYEAKERGRNRL 410
            +A +II  + +   +       + SIG   YP DG     ++QNADTAMY AK  GRN  
Sbjct: 950  VAGKIIEDVARSLRVGAHELHTSASIGISLYPDDGETVPTVMQNADTAMYHAKAIGRNNF 1009

Query: 411  IKFNDQMNKEARMRLWLEIELQKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVEG 470
              F   MN+ A  RL LE +L++A+  + LE+ +QP+       + G EAL+RW+HP +G
Sbjct: 1010 QFFASAMNRAATERLELERKLRQAMVNDELELHFQPQFALAADRVTGVEALLRWRHPEDG 1069

Query: 471  YISPGAFIPVAEKAGLIEHLGRVVMREVFATVKRWKLQGILPGRVAINISPEQFGNPQLI 530
             I P  FIP+AE+ GLI  +G  V++     +K W  QG+ P R+A+N+S  Q    +  
Sbjct: 1070 LIPPDRFIPIAEETGLIVGIGDWVLQAACRQLKAWLDQGLPPLRMAVNLSTRQLKEKEFP 1129

Query: 531  DYLEKLLRTTGLDPNNITFELTESAVMSDSEHTQQMLNAIKKLGFTLSIDDFGTGYSSLA 590
              +  +L+ TGL    +  E+TES VM   E     L A+  +G TL+IDDFGTGYSSL+
Sbjct: 1130 SRVAAILQETGLPAVLLELEITESGVMERPEEAITTLQALNDMGVTLAIDDFGTGYSSLS 1189

Query: 591  YLARFPIDELKIDRAFISNIDTLPKQLTVIENIINLGRSLNLTVVAEGVETQQQATLLSN 650
            YL  FPID LKIDR+F+ +I+  P    +    I L  SL L VVAEGVET  Q  +L+ 
Sbjct: 1190 YLKLFPIDRLKIDRSFVRDIERDPDDAAIARGTIALAHSLGLEVVAEGVETSAQLDMLAA 1249

Query: 651  LNCHSIQGFHFYRPQPKHEVEELFAQ 676
              C  +QG+ F RP P        AQ
Sbjct: 1250 DGCDEVQGYFFSRPLPLAAATAFLAQ 1275



 Score = 37.0 bits (84), Expect = 6e-06
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)

Query: 15  KITSHSPFFFAILNDQHQYVMVNERYCDIAGLSSEEMVGMSDSQVLGEHFYRHLKPFYER 74
           K+ ++SP    I +  ++ + VN  +CDI G + EE++G  D ++L     RH K FY +
Sbjct: 729 KVFANSPEAIMICDQGNRIISVNRAFCDITGYAQEEVLG-QDPRMLASG--RHDKDFYRQ 785