Pairwise Alignments

Query, 684 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 953 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  306 bits (783), Expect = 4e-87
 Identities = 210/670 (31%), Positives = 337/670 (50%), Gaps = 29/670 (4%)

Query: 20  SPFFFAILNDQHQYVMVNERYCDIAGLSSEEMVGMSDSQVLGEHFYRHLKPFYERAFNN- 78
           SP F+   + Q +YV  NE +    G    E++G S   +  +           + F+N 
Sbjct: 288 SPLFYK--DAQGRYVGCNEAFLTYLGKERHELLGKSVYDLAPKELADIYAAADRQLFDNP 345

Query: 79  --EHIESELTLSEIDLETSLHFSLSPIMINDRVQYLVFHAIDTSEKQILVRSLEESESKY 136
             +  ES+   ++      ++   + +    RV  LV   +D +E++   R  EE     
Sbjct: 346 GKQVYESQACYADGSKHDVIYNKATFMDAEGRVAGLVGVMVDITERK---RQEEELRLAA 402

Query: 137 ALLTTLLPDGLMMVENDCIISANPSAARLLGFDDAQKLLGENLSRLFIDEKTKTVFSSQL 196
            +  T     L+   ++ I S N +     G+  A+++LG N   L      KT +    
Sbjct: 403 KVFDTSNEAFLVTDADNNIRSVNRAFCETTGYS-AEEVLGRNPRLLSSGHHDKTFYRQMW 461

Query: 197 ASLLTEKPLVCLTGPRCGFERKIQLHAGCTSL---LGNQSQLI----LLQDADEAPKQFS 249
            +L ++       G      +  +++   T +     +Q +++    +  D  +  K   
Sbjct: 462 EALNSQG---YWQGEIYDRRKSGEIYPKWTRINVVKDDQGRVVNHVAVFSDISDR-KALE 517

Query: 250 ATTQVDAHIDSLTGLYNRHGFTKRLEQCIQNE--------TPLVMLYLDIDNFKNINDSL 301
              Q  A  D LTGL NR+    RLEQ +++          P+ +L LD+D+FK INDSL
Sbjct: 518 ERLQFLAQHDHLTGLPNRNLLRLRLEQAVESAMERGAGGINPVALLLLDLDHFKTINDSL 577

Query: 302 GHHIGDKVIKEVAARLKRLLPQQAVLGHLGGDEFGLILPEPEHNRSAEMLADRIISLINQ 361
           GHH GD++++ V  RLK +L + + L   GGDEF ++LP+ +        A+ +++ +  
Sbjct: 578 GHHAGDQLLRTVVKRLKNILRESSTLCRQGGDEFLIVLPQAQDLARVSRAAETVLAALAT 637

Query: 362 PFDLHHFSKRLACSIGSVRYPGDGNDARVLLQNADTAMYEAKERGRNRLIKFNDQMNKEA 421
           PF++      +  SIG    P DG+D   LL+ ADTA+  AK+ GRN    F + MN   
Sbjct: 638 PFEVDGHPLSITGSIGISLAPDDGSDFDTLLKKADTALVHAKQSGRNAYRFFTEAMNVST 697

Query: 422 RMRLWLEIELQKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVEGYISPGAFIPVA 481
             RL L+  L +AL++  L ++YQP+++     + G EAL+RW+ P EG + PG FIP+A
Sbjct: 698 LERLTLQQRLHQALERQELVLYYQPQLDLASGRVVGVEALLRWRTP-EGLVPPGKFIPLA 756

Query: 482 EKAGLIEHLGRVVMREVFATVKRWKLQGILPGRVAINISPEQFGNPQLIDYLEKLLRTTG 541
           E+ GLI  +G  V++E     + W   G+ P  +A+N+S  QF    L+  +   L    
Sbjct: 757 EETGLIVPMGAWVIQEACRQARTWLDAGLPPMTMAVNLSALQFHRDNLLITVGDALSAAS 816

Query: 542 LDPNNITFELTESAVMSDSEHTQQMLNAIKKLGFTLSIDDFGTGYSSLAYLARFPIDELK 601
           L   ++  ELTES ++ D+E T   L A+  +G  LSIDDFGTGYSSLAYL RF +D+LK
Sbjct: 817 LPAASLELELTESILIQDAEATLATLKAMNAMGVLLSIDDFGTGYSSLAYLKRFTVDKLK 876

Query: 602 IDRAFISNIDTLPKQLTVIENIINLGRSLNLTVVAEGVETQQQATLLSNLNCHSIQGFHF 661
           ID++F+ +I +      ++  ++ +  SL L  +AEGVET+ QA  L    C  +QG+ +
Sbjct: 877 IDQSFVRDITSDGDSAAIVRAVVQMASSLKLKTIAEGVETESQAAALRATGCDEVQGYLY 936

Query: 662 YRPQPKHEVE 671
            RP P  E E
Sbjct: 937 ARPMPAAECE 946



 Score = 32.0 bits (71), Expect = 1e-04
 Identities = 60/274 (21%), Positives = 114/274 (41%), Gaps = 49/274 (17%)

Query: 14  AKITSHSPFFFAILNDQHQYVMVNERYCDIAGLSSEEMVGMSDSQVLGEHFYRHLKPFYE 73
           AK+   S   F + +  +    VN  +C+  G S+EE++G +   +   H   H K FY 
Sbjct: 402 AKVFDTSNEAFLVTDADNNIRSVNRAFCETTGYSAEEVLGRNPRLLSSGH---HDKTFYR 458

Query: 74  R---AFNNE-HIESELTLSEIDLETSLHFSLSPIMINDRVQYLVFHAI--DTSEKQILVR 127
           +   A N++ + + E+       E    ++   ++ +D+ + +   A+  D S+++ L  
Sbjct: 459 QMWEALNSQGYWQGEIYDRRKSGEIYPKWTRINVVKDDQGRVVNHVAVFSDISDRKALEE 518

Query: 128 SLEESESKYALLTTLLPDGLMMVENDCIISA---------NPSAARLLGFDDAQKLLGEN 178
            L +  +++  LT L    L+ +  +  + +         NP A  LL  D   K + ++
Sbjct: 519 RL-QFLAQHDHLTGLPNRNLLRLRLEQAVESAMERGAGGINPVALLLLDLDHF-KTINDS 576

Query: 179 LSRLFIDEKTKTVFSSQLASLLTEKPLVCLTGPRCGFERKIQLHAGCTSLLGNQSQLILL 238
           L     D+  +TV   +L ++L E   +C  G                   G++  ++L 
Sbjct: 577 LGHHAGDQLLRTVV-KRLKNILRESSTLCRQG-------------------GDEFLIVLP 616

Query: 239 QDADEAPKQFSATT---------QVDAHIDSLTG 263
           Q  D A    +A T         +VD H  S+TG
Sbjct: 617 QAQDLARVSRAAETVLAALATPFEVDGHPLSITG 650