Pairwise Alignments

Query, 684 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1251 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  310 bits (794), Expect = 3e-88
 Identities = 168/415 (40%), Positives = 247/415 (59%), Gaps = 11/415 (2%)

Query: 259  DSLTGLYNRHGFTKRLEQCIQNETP-----LVMLYLDIDNFKNINDSLGHHIGDKVIKEV 313
            D LTGL NR     R+E+ IQ           +L LD+D FK INDS GH  GD ++ EV
Sbjct: 776  DPLTGLPNRALLLDRIERAIQRRRRNDSYRFAVLMLDLDRFKFINDSHGHTTGDNLLVEV 835

Query: 314  AARLKRLLPQQAVLGHLGGDEFGLILPEPEHNRSAEMLADRIISLINQPFDLHHFSKRLA 373
            A R++ ++     +  LGGDEF L+L + +  R    +  R+++ + +P  +     R +
Sbjct: 836  ARRMRPVVRAGDTVARLGGDEFALLLEDVDSPRRIVQITRRLLAALERPVRMGAKVVRTS 895

Query: 374  CSIGSVRYPGDGNDARVLLQNADTAMYEAKERGRNRLIKFNDQMNKEARMRLWLEIELQK 433
             SIG V      + A  LL++AD AMY+AK +G+ R   FN  M++     + LE +L  
Sbjct: 896  ASIGMVLRTQGYDTADALLRDADIAMYQAKAQGKGRFRVFNQSMHRHTMEMMTLEGDLSM 955

Query: 434  ALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVEGYISPGAFIPVAEKAGLIEHLGRV 493
            A+++  L + YQP +      + G EALVRW+HP EG + P  FIP+AE+ GLI  +G+ 
Sbjct: 956  AMRRKQLYLEYQPVLAVDGARLLGFEALVRWRHPTEGAVPPARFIPMAEETGLILRIGQW 1015

Query: 494  VMREVFATVKRWKLQGILPGR----VAINISPEQFGNPQLIDYLEKLLRTTGLDPNNITF 549
            V+ +  AT+ RW+    LPG     V++N+S  Q   P L   + ++L  TGL P  +  
Sbjct: 1016 VLEQAAATLARWR--ATLPGAHDLYVSVNLSARQASQPNLTGRVARILSDTGLPPEALKL 1073

Query: 550  ELTESAVMSDSEHTQQMLNAIKKLGFTLSIDDFGTGYSSLAYLARFPIDELKIDRAFISN 609
            E+TE+A+M D +   Q L A+++LG  + IDDFGTGYSSLAYL RFP+D LK+DR+F+S 
Sbjct: 1074 EITETAIMKDPDGALQRLEALRRLGVGIGIDDFGTGYSSLAYLQRFPVDTLKVDRSFVSA 1133

Query: 610  IDTLPKQLTVIENIINLGRSLNLTVVAEGVETQQQATLLSNLNCHSIQGFHFYRP 664
            +    +   ++  ++ LGRSL L VVAEGVET +Q  +++ L CHS+QG+HF RP
Sbjct: 1134 VAGDAENREIVRTVVTLGRSLGLHVVAEGVETAEQFAIVAELGCHSVQGYHFSRP 1188