Pairwise Alignments

Query, 684 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1077 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  303 bits (776), Expect = 3e-86
 Identities = 168/438 (38%), Positives = 256/438 (58%), Gaps = 8/438 (1%)

Query: 246  KQFSATTQVDAHIDSLTGLYNRHGFTKRLEQCIQ----NETPLVMLYLDIDNFKNINDSL 301
            KQ+       AH D+LTGL NR  F +RL+  IQ    +   L +L +D+D FK IND  
Sbjct: 623  KQYEQDLWYQAHFDTLTGLPNRKLFNERLQHEIQLAQHDSRKLAILLIDLDQFKYINDVQ 682

Query: 302  GHHIGDKVIKEVAARLKRLLPQQAVLGHLGGDEFGLILPEPEHNRSAEMLADRIISLINQ 361
            GH  GD ++++VA RL+ +  +  ++  +GGDEF LILP   +  + E +A RII  ++ 
Sbjct: 683  GHATGDLLLQDVAKRLENIAGKNDLIARIGGDEFVLILPRVTNEFAIEHMASRIIETLST 742

Query: 362  PFDLHHFSKRLACSIGSVRYPGDGNDARVLLQNADTAMYEAKERGRNRLIKFNDQMNKEA 421
            PF+L+    +++ S G   YP DG D   L +N + AMY+AK+ GRN    F   MN+  
Sbjct: 743  PFNLNEREIQISASFGIGVYPEDGLDVSSLTRNTEMAMYQAKDAGRNNFKYFTSGMNQAM 802

Query: 422  RMRLWLEIELQKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVEGYISPGAFIPVA 481
              R+ LE  L++A+ Q+   + YQP V  +   +   EAL+RW+ P  G I P  FI +A
Sbjct: 803  FARMELEQRLRRAVAQDEFTLHYQPIVEMKTGKVCSVEALIRWQDPDLGLIPPDQFIGIA 862

Query: 482  EKAGLIEHLGRVVMREVFATVKRWKLQGILPGRVAINISPEQFGNPQLIDY---LEKLLR 538
            E+ GLIE +G  V+ +    +++W+  G L   VAIN+S  Q  N + + +   L++   
Sbjct: 863  EETGLIEPMGEWVLNQAMHDLRQWQQLG-LQLNVAINVSSRQCVNARGMGFDQVLQECFN 921

Query: 539  TTGLDPNNITFELTESAVMSDSEHTQQMLNAIKKLGFTLSIDDFGTGYSSLAYLARFPID 598
               ++P N+  E+TES +M D+ H    L AI++LG  + IDDFGTGYSSL+YL +FPI 
Sbjct: 922  RHHINPRNVHIEITESMLMGDASHCLSTLEAIRRLGSQIYIDDFGTGYSSLSYLKKFPIS 981

Query: 599  ELKIDRAFISNIDTLPKQLTVIENIINLGRSLNLTVVAEGVETQQQATLLSNLNCHSIQG 658
             +KIDR+F+ N  +      +++ I+ +G+SL + +VAEG+ET+ Q  LL +L CH  QG
Sbjct: 982  VIKIDRSFVENALSNNSNTNLVKAIVMMGQSLEMELVAEGIETEAQWNLLRDLGCHYAQG 1041

Query: 659  FHFYRPQPKHEVEELFAQ 676
            +   +P P   +  L +Q
Sbjct: 1042 YLISKPLPFAAITPLLSQ 1059