Pairwise Alignments

Query, 684 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1505 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  310 bits (795), Expect = 2e-88
 Identities = 208/627 (33%), Positives = 317/627 (50%), Gaps = 21/627 (3%)

Query: 58   QVLGEHFYRHLKPFYERAFNNEHIESE-LTLSEIDLETSLHFSLSPIMINDRVQYLVFHA 116
            QVL +H   H  PF+E  +  EH     L + E       +    P+ +    + +    
Sbjct: 889  QVLTDHLQGHT-PFFEMEYRIEHSPGNWLWILERGKVVETNNQEQPMRMTGTTRNI---- 943

Query: 117  IDTSEKQILVRSLEESESKYALLTTLLPDGLMMVENDCIISANPSAARLLGFDDAQKLLG 176
              TS K I    +  S+   ++   ++  GL    +  I S NP+ + + G+ + Q +  
Sbjct: 944  --TSRKLIENELVLSSQVLNSMNEAVVVAGL----DYRIRSVNPAFSAITGYSERQ-ISD 996

Query: 177  ENLSRLFIDEKTKTVFSSQLASLLTEKPLVCLTGPRCGFERKIQLHAGCTSLL---GNQS 233
            + L  L    + + +F+S    LL  K        R    + I +      ++   G  S
Sbjct: 997  KYLIHLAYSRQQRDLFNSIEQQLLRHKHWAGEIWIRNRARKAILVWLEINQVIDVKGETS 1056

Query: 234  QLILLQDADEAPKQFSATTQVDAHIDSLTGLYNRHGFTKRLEQCI----QNETPLVMLYL 289
              + +       K+     +  A  D+LTGL NR  F  RL   I    ++   + +L+L
Sbjct: 1057 HFVAVFTDITERKKAEEDLRFLASFDTLTGLPNRTLFQDRLNHAISQAHRSNNIVALLFL 1116

Query: 290  DIDNFKNINDSLGHHIGDKVIKEVAARLKRLLPQQAVLGHLGGDEFGLILPEPEHNRSAE 349
            D+D FK+INDS+GHHIGD ++K VA RL+  + +   +  LGGDEF +IL      ++A 
Sbjct: 1117 DLDRFKHINDSMGHHIGDLLLKAVAHRLQNAVREGDTVARLGGDEFTIILEGVAKTKAAT 1176

Query: 350  MLADRIISLINQPFDLHHFSKRLACSIGSVRYPGDGNDARVLLQNADTAMYEAKERGRNR 409
            +++++++     PF L   S  ++ SIG   YP D  D   L++ ADTAMY AK  GRN 
Sbjct: 1177 LISEKVLKAFQAPFLLDDKSLTISTSIGISLYPNDAEDVDSLIKFADTAMYHAKALGRNN 1236

Query: 410  LIKFNDQMNKEARMRLWLEIELQKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVE 469
               + +++N+ A   + LE  L++A+ +N L + YQPK   R  S+ G EAL+RW H   
Sbjct: 1237 FQFYTNKLNEMATRHVQLEAGLKQAISRNELSLVYQPKFCLRKGSLTGLEALLRWHHSEL 1296

Query: 470  GYISPGAFIPVAEKAGLIEHLGRVVMREVFATVKRWKLQGILPGRVAINISPEQFGNPQL 529
            G ISP  FIP+AE+ G+I  +G  V+      +  W   G     +A+N+S  Q     +
Sbjct: 1297 GPISPAEFIPLAEETGIINQIGHWVINHACQQLAEWNELGFGDISMAVNLSARQL-KADI 1355

Query: 530  IDYLEKLLRTTGLDPNNITFELTESAVMSDSEHTQQMLNAIKKLGFTLSIDDFGTGYSSL 589
            I  +E  L  +GL    +  ELTES +M + + +  +L+ +K LG T+++DDFGTGYSSL
Sbjct: 1356 ISTIEVALSVSGLPAKALELELTESMIMGNPQESVNILSKLKALGLTIAVDDFGTGYSSL 1415

Query: 590  AYLARFPIDELKIDRAFISNIDTLPKQLTVIENIINLGRSLNLTVVAEGVETQQQATLLS 649
            +YL RFPID LKIDR F+ +I   P    +   II L  SL L VVAEGVETQ+Q   L+
Sbjct: 1416 SYLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNVVAEGVETQEQLNFLA 1475

Query: 650  NLNCHSIQGFHFYRPQPKHEVEELFAQ 676
               C  +QGF   +P    +   L  Q
Sbjct: 1476 LQGCDQVQGFLLSKPLSAQDCLALLQQ 1502