Pairwise Alignments

Query, 684 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1433 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  322 bits (825), Expect = 8e-92
 Identities = 167/420 (39%), Positives = 253/420 (60%)

Query: 259  DSLTGLYNRHGFTKRLEQCIQNETPLVMLYLDIDNFKNINDSLGHHIGDKVIKEVAARLK 318
            D LTGL NR      L   +  E    ++ LD+DNFK INDSLGH IGD+++K V+ R+K
Sbjct: 1004 DLLTGLPNRSNLQVTLGNLVNKEITHALMVLDLDNFKRINDSLGHQIGDQLLKLVSIRIK 1063

Query: 319  RLLPQQAVLGHLGGDEFGLILPEPEHNRSAEMLADRIISLINQPFDLHHFSKRLACSIGS 378
             +LP+   +  LGGDEF ++L +     ++  +A R+I      F++ +    L  SIG 
Sbjct: 1064 SILPKNTSIYRLGGDEFAIVLDKTSDISASAAIAGRVIEAFKTMFEIGNEQLVLGVSIGI 1123

Query: 379  VRYPGDGNDARVLLQNADTAMYEAKERGRNRLIKFNDQMNKEARMRLWLEIELQKALQQN 438
            V YP D    + LL+ AD AMY AK  G N    +++ +N+ A  +L +E  +++ L+++
Sbjct: 1124 VFYPEDEQSEQALLRKADIAMYHAKSAGGNCYQFYSESLNQHAIKQLEIENLIREGLKED 1183

Query: 439  GLEVWYQPKVNARDFSINGAEALVRWKHPVEGYISPGAFIPVAEKAGLIEHLGRVVMREV 498
              EV+YQPKV+ +   + G EALVR  HP  G I P  FIP+AE+ GLI  +G +V+R+ 
Sbjct: 1184 LFEVYYQPKVDLKSGHVAGMEALVRLNHPTRGLIPPNDFIPLAEENGLIIEIGEIVLRKA 1243

Query: 499  FATVKRWKLQGILPGRVAINISPEQFGNPQLIDYLEKLLRTTGLDPNNITFELTESAVMS 558
                ++W+ QG+  GRVA+N+S  QF  P L   +E +LR T L  +++  E+TE  V+ 
Sbjct: 1244 CFAAQKWREQGLFKGRVAVNLSSRQFALPDLQQRIESILRLTQLPASHLELEITEGTVIK 1303

Query: 559  DSEHTQQMLNAIKKLGFTLSIDDFGTGYSSLAYLARFPIDELKIDRAFISNIDTLPKQLT 618
              E    ++  + K+G +L++DDFGTGYSSL+YL RFPI  LKID+AF+ +ID   + L 
Sbjct: 1304 QPEMAITVMQQLAKMGVSLALDDFGTGYSSLSYLKRFPIHTLKIDKAFVDDIDKSDRDLK 1363

Query: 619  VIENIINLGRSLNLTVVAEGVETQQQATLLSNLNCHSIQGFHFYRPQPKHEVEELFAQNR 678
            ++++II +  ++ L+VV EGVE   Q  +L  LNC  IQG+ F +   + E  +L   +R
Sbjct: 1364 MVDSIITIAHNMGLSVVGEGVEQAAQLNILRALNCEEIQGYIFSKAINEIEFTQLLQDDR 1423



 Score = 26.6 bits (57), Expect = 0.009
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 13/99 (13%)

Query: 4   QTSSQLKHWFAKITSHSPFFFAILNDQHQYVMVNERYCDIAGLSSEEMVG-MSDSQVLGE 62
           Q   QLK +   I + S   F IL+ ++++V VNE  C I+  +  + +G +    +  E
Sbjct: 873 QKEEQLKLFEKAIENISEGMF-ILDSEYRFVEVNEACCRISQRNRTDFIGNLLTFDLYPE 931

Query: 63  HFYRHLKPFYER-----------AFNNEHIESELTLSEI 90
            F   ++   ++             +N H   ELT+  I
Sbjct: 932 SFSNQIRTMLKQQGRWASEVEASRGDNSHFHMELTIDAI 970