Pairwise Alignments

Query, 337 a.a., protease from Vibrio cholerae E7946 ATCC 55056

Subject, 666 a.a., protease from Pseudomonas fluorescens FW300-N2C3

 Score =  102 bits (254), Expect = 3e-26
 Identities = 90/302 (29%), Positives = 135/302 (44%), Gaps = 43/302 (14%)

Query: 1   MELLCPAGNLPALKTAIDCGADAVYIGFKDDTNARHFAGLNFSGKKLEKAVDYVHDHNKK 60
           +ELL PA ++   + AI  GADAVYIG      ARH A  N  G  + + V++ H ++ +
Sbjct: 8   LELLSPARDVTIAREAILHGADAVYIG-GPSFGARHNA-CNEVGD-IARLVEFAHRYHAR 64

Query: 61  IHIALNTFAHPNGFERWTNAVDQAADLGVDALIIADIAVLEYAARHYPHLELHLSVQASA 120
           +   +NT  H N  E     + Q  D GVDALI+ D+ V+E      P +ELH S Q   
Sbjct: 65  VFTTINTILHDNELEPARQLIHQLYDAGVDALIVQDLGVMEL---DIPPIELHASTQTDI 121

Query: 121 TNVKAVEFYHQNFNVKRVVLPRVLSIHQVKQLSRNIPQGVELEVFAFGSLCIMSEGRCYL 180
             +   +F  Q     ++VL R L++ +++ ++      +E   F  G+LC+   G+C +
Sbjct: 122 RTLARAKFLDQ-AGFSQLVLARELNLQEIRAIADETDAAIEF--FIHGALCVAFSGQCNI 178

Query: 181 SSYMTGESPNTVGACSPAKYVRWQETESGLESRLNEILIDKYAAGENAGYPTLCKGRFIT 240
           S    G S N  G CS A              RL   L D              +GR + 
Sbjct: 179 SHAQNGRSANR-GDCSQA-------------CRLPYTLKDD-------------QGRVVA 211

Query: 241 DIEGERKCYHALEEPTSLNTLSLLPELFAANVASVKIEGRQRSPAYVEQVTRTWRAAIDR 300
               E+      +   S N  +L+     A V S KIEGR +   YV+ +T  +R  +D 
Sbjct: 212 ---YEKHLLSMKDNNQSANIRALV----EAGVRSFKIEGRYKDMGYVKNITAYYRQRLDD 264

Query: 301 YL 302
            L
Sbjct: 265 VL 266



 Score = 26.6 bits (57), Expect = 0.002
 Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 15/100 (15%)

Query: 46  KLEKAVDYVHD-----HNKKIHIALNTFAHPNGFERWTNAVDQAADLGVDALIIADIAVL 100
           K E+A++ +HD        + H        P  F    + +       ++AL  A +A  
Sbjct: 457 KPEQALEQLHDLLGQLGTTEYHATAIELDAPQAFFIPNSQLKALRREAIEALTAARVAAH 516

Query: 101 EYAARH--------YPHLELHLSVQASATNVKAVEFYHQN 132
               R         YP  E HLS  A+  N KA +FYH++
Sbjct: 517 PRGGRKAETSPPPVYP--ESHLSFLANVYNQKARDFYHRH 554