Pairwise Alignments

Query, 337 a.a., protease from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., Collagenase and related proteases from Pseudomonas stutzeri RCH2

 Score =  142 bits (357), Expect = 2e-38
 Identities = 102/325 (31%), Positives = 159/325 (48%), Gaps = 33/325 (10%)

Query: 2   ELLCPAGNLPALKTAIDCGADAVYIGFKDDTNARHFAGLNFSGKKLEKAVDYVHDHNKKI 61
           ELL PAG L +++ A   GADAVY G      +       F    L+  +D  H   K+ 
Sbjct: 8   ELLSPAGTLKSMRYAFAYGADAVYAG--QPRYSLRVRNNEFDHANLKLGIDEAHALGKQF 65

Query: 62  HIALNTFAHPNGFERWTNAVDQAADLGVDALIIADIAVLEYAARHYPHLELHLSVQASAT 121
           ++ +N   H    + +   ++    +G DALI++D  ++    +H+P + +HLSVQA+A 
Sbjct: 66  YVVVNIAPHNAKLKTFIKDLEPVVAMGPDALIMSDPGLIMLVRQHFPQMTIHLSVQANAV 125

Query: 122 NVKAVEFYHQNFNVKRVVLPRVLSIHQVKQLSRNIPQGVELEVFAFGSLCIMSEGRCYLS 181
           N   V+F+ ++  V RV+L R LS+ ++ ++   +P G+ELEVF  G+LC+   GRC LS
Sbjct: 126 NWATVKFW-ESQGVSRVILSRELSLEEIGEIREQVP-GMELEVFVHGALCMAYSGRCLLS 183

Query: 182 SYMTGESPNTVGACSPAKYVRWQ-ETESGLESRLNEILIDKY------AAGENAGYPTL- 233
            Y+    PN  G+C+ A   RW+ +T    E+ + +I + KY       A      PTL 
Sbjct: 184 GYINKRDPNQ-GSCTNA--CRWEYKTHEAKENEIGDI-VHKYEPIAVQPAEPVRSEPTLG 239

Query: 234 ---------------CKGRFITDIEGERKCYHALEEPTSLNTLSLLPELFAANVASVKIE 278
                            G F++  E E   Y  +     L  +  +  L    V S+KIE
Sbjct: 240 VGAPTDEVFLLEDSSRPGEFMSAFEDEHGTY--IMNSKDLRAVQHVERLVQMGVHSLKIE 297

Query: 279 GRQRSPAYVEQVTRTWRAAIDRYLA 303
           GR +S  YV +  + +R AID  LA
Sbjct: 298 GRTKSHYYVARTAQVYRKAIDDALA 322