Pairwise Alignments

Query, 337 a.a., protease from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., peptidase, U32 family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 92.8 bits (229), Expect = 2e-23
 Identities = 85/308 (27%), Positives = 134/308 (43%), Gaps = 43/308 (13%)

Query: 1   MELLCPAGNLPALKTAIDCGADAVYIGFKDDTNARHFAGLNFSGKKLEKAVDYVHDHNKK 60
           +ELL PA N      AI  GADAVYIG      AR  AG   S + + +   + H ++ +
Sbjct: 19  LELLAPAKNADYGIEAIRHGADAVYIG-GPAFGARATAG--NSVEDIARLCTFAHKYHAQ 75

Query: 61  IHIALNTFAHPNGFERWTNAVDQAADLGVDALIIADIAVLEYAARHYPHLELHLSVQASA 120
           + +ALNT    +        +    + G DALI+ D+ VL+    + P + LH S Q   
Sbjct: 76  VFVALNTILMDDELAVAEKLIWDVYNAGADALIVQDMGVLQL---NLPPIALHASTQMDN 132

Query: 121 TNVKAVEFYHQNFNVKRVVLPRVLSIHQVKQLSRNIPQGVELEVFAFGSLCIMSEGRCYL 180
            N + V F  Q     +VVL R L + Q+++++ +    +++E F  G+LC+   G C L
Sbjct: 133 RNPEKVAFLEQ-VGFSQVVLARELGLSQIREVAAH--TNMQIEFFIHGALCVAYSGLCNL 189

Query: 181 SSYMTGESPNTVGACSPAKYVRWQETESGLESRLNEILIDKYAAGENAGYPTLCKGRFIT 240
           S   +  S N  G CS     +       L++R  ++               L K   + 
Sbjct: 190 SHAFSNRSANR-GECS-----QMCRLPGNLKTRQGDV---------------LAKNEHLL 228

Query: 241 DIEGERKCYHALEEPTSLNTLSLLPELFAANVASVKIEGRQRSPAYVEQVTRTWRAAIDR 300
            ++               N    L  L  A V S KIEGR +  +YV+ VT  +R  +D 
Sbjct: 229 SLKDN-------------NQTDNLEALIDAGVRSFKIEGRLKDLSYVKNVTAHYRQKLDA 275

Query: 301 YLANPAQY 308
            +A   ++
Sbjct: 276 IMARRPEF 283